| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4266 |
|---|
| Symbol | |
|---|
| ID | 3932418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007801 |
|---|
| Strand | + |
|---|
| Start bp | 60909 |
|---|
| End bp | 61907 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637902323 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_512206 |
|---|
| Protein GI | 89057752 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5534] Plasmid replication initiator protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.932297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.331154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCA GTGCGGGGGG TCTTTCGGCC TCTGACGGGG ATTTCTTTCT GTGCGATCTT
TTTGACCCGG TTCCCAAGGG TGATCTGGGC ACGATGGAAC ATCCGGTCTT CTCGCTCGCC
ACACGGCCCG ACCGCCGGAT CCTGACCTAT GAACATAACG GGGTCGAGAT CACGGTGACG
CCGTCGGTCA AGGGGCGGGC CACGATCTTC GATAAGGACA TCCTGATCTT CTGCACCTCG
CAGCTGATGG CAGCGATTAA TGCCAATCGC CCCGTGAGCC GGACGTTGCA ACTGACCGCC
CACGACCTGC TGTTGGCCAC GGGGCGCGAT CGCAGCGGTG ATGGCTACAA GCGGCTGCGC
GCGGCTTTCG AGCGTCTGGC GGGCACCCGG ATCACCACCA ATTTGATCAC CGGCGGGGTG
GAGGTAACCC AGGGCTTCGG TCTTATCGAG GCCTGGCAGA TCGTGCGCAG AACCCGCAAT
GGGCGGATGG TCAGCGTGTC CGTAACCCTC TCTGAATGGC TGTATAGAGC CGCTTTGACG
AAGTCGGTTC TGACGCTGAG CCGTCAGTAT TTTCGCATGC GAAAACCGCT TGAACGGCGC
ATCTATGAGC TGGCCCGAAA ACATTGCGGT CGGCAGAACG AATGGCGGGT GTCGGTGGAT
ACCCTGCTGA AAAAGTCCGG CTCCGCCAGC CCGCGCCGCG TGTTCCGCGC CATGCTGCGG
GAGATGATCG CCGCCGATGC GCTGCCCGAT TATCACCTGC AGGAAGAACC AGGTGATATC
CTTCGTGTTA CCCTGCGCGA TGCCGTGATC GAGGCGGCGG GCCGTCCGAT CGTATCCTCT
GATACGCTGA ATCAGGCTCG GGCGTTGATG CCCGGTTGGG ATGTCTACGT GCTGGAGGCG
GAATGGCGCA ATTGGTGGGC CGCAACAGGC CGCCCACATC TGCGGTCACC CGACAAGGCG
TTCCTGGGGT GGGTGCGGAC GCAGGCCGCC CGCGCCTAG
|
|---|
| Protein sequence | MAGSAGGLSA SDGDFFLCDL FDPVPKGDLG TMEHPVFSLA TRPDRRILTY EHNGVEITVT
PSVKGRATIF DKDILIFCTS QLMAAINANR PVSRTLQLTA HDLLLATGRD RSGDGYKRLR
AAFERLAGTR ITTNLITGGV EVTQGFGLIE AWQIVRRTRN GRMVSVSVTL SEWLYRAALT
KSVLTLSRQY FRMRKPLERR IYELARKHCG RQNEWRVSVD TLLKKSGSAS PRRVFRAMLR
EMIAADALPD YHLQEEPGDI LRVTLRDAVI EAAGRPIVSS DTLNQARALM PGWDVYVLEA
EWRNWWAATG RPHLRSPDKA FLGWVRTQAA RA
|
|---|
| |