| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4263 |
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| Symbol | |
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| ID | 3932415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | + |
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| Start bp | 54919 |
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| End bp | 58098 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637902320 |
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| Product | hypothetical protein |
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| Protein accession | YP_512203 |
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| Protein GI | 89057749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.114223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTC GTTTTACCTC GCTGTTTGAA ATGTTGAATA CGCGGCGCAC AGCATTGGTC
CTTGGCAGTA CAACCATGGT CGCAGGCTGC GTGAGTGGCG GGGGCGAGAC ACCCACTGAA
GAGCCTGCCG TTGAAACCTC AAACGTTGCC CAAGGGCCGC AGCTGGCCGC CGACCCCTTA
TTTCAAATAC CGATGATTAC ACAACCGGAT CCGGTGTCCA TCCCGGCAGA GCCGCGCGTG
AGTGAACCCA CACCGCCCAA AGACCCCTCT ATCACACCCG AAGCGCCGGC CCCTTCCCCA
CCGCCAAGTC CACCGGTCGC GGCACCGGAG CCGGAGCCCC CCGAACCACC AAATCCGCCA
GTCGCTGCTC CAGAGGCAGA GGATTCCGCT GATAGTGCCC CTCAAACGAG TGGAGCAATC
TTGATTGAAG CGAATCTGGC CGTGGCGGGG GGACGTGTCG CACTGCTCGA AACAGGCGAA
GAAAACATCC GCTCGATCGA AATCCTCAAC GGACCGGACA TCGGCAATCT CACTGTGAAC
CCAGACAACA CGCTGGCGTT GGTTCTGTCG GGTACAGACC ACTCAGGTCC GTTGTCGTTC
AGTTACAATG TCACCTACGA CGATGGCACG ACCAAGTTTT TCGAACAGAC CGTAGACGTG
GCACCCCTGA CCCAACTGGA AGGATGGTCC TCCGGTGAAA AGCTCTACAT GCTGGAGACC
GACGACAATG GCGATCTTCT GATCGAACAT GGAGACGTGC ACCAGAAAGT TTATATATCC
GGCAGTAGCG ACGCCCTGTC GCGTGATGAC ATTGCCGAAA AGGAAGGCAT CGCCCCCGCA
GACATCGATA TGATGTGGCT ACTCGACCAT CCGGAGTATG GTGCAACGCC TGAAATGGCG
CTGGATGTCG AAATGGGCAT GGAAATGTGG AGTGGCCTTA CGGCATTCAC ATTCAATGAG
ACTGGCGTCG GGCCGCTCAG GCTGGACGCC GAGCCGGGAT CCCATTGGCT CTTGTTTGAA
AAGGGTTACG AATACGAGGT CGAGCGGCTG ATCTACGAAG ATTCCGAAGG GGAATCCGCT
CTGCATCCGC TTGTCGTGAC TTCCTATGGG GAAGGCGAAG ATCCCATTAT CAACAGCGAC
GTCATGATCT TCCAGTCGCC TAGTGAAAAC ATTGTCATCA ACGGGCTGGC CTTGACCGGT
GGGCTCTCGG ATTTCGCGAC AACCAACCTG ATCCTAGATG ACATGACATT CACGGAAAAT
GGCATCAGCA TTCGTGGATC AGAAGGCGTT ACTCTGCGGA ATTCATCAAT TTACGACGCT
GTAGACAAAC ACCCATTCAC CGACGACGAA TGGGTTGCGG GCTGGGACAA AAATTCCGGC
ATCTGGGTGG GATCTACTGA TGGCCTGCTG ATGGAAGACC TGTTCTTTGA CAGGAACGGC
TGGTCCCCAG ACTATCGCTA CGACATGAGT ACCGAAGGTG GCCTGCCGCC CAATATGTTC
AGCCACAACA TCTACATCCA GTTCGACAAT ACCGATGTCA CATTCCGCGA CAATATCACT
ATGCGTGGAG CATCTTACGG CGCGCAATTC CGGTCTGGCG GGTTGGTCGA AGACAACGTC
TATCTGGACA ATAATGGGGC CACAAACCTG CAAGGCGGCA AATATCTCGA CGACGACACG
AAATATCTCA ACTTCATCCT GTTTACAGAC AACGTCATCA CTTCAGCGGG CGACAAGGAC
GCTCTCGACC AAATCGGAGC CCGTTCGGCC GGGGTCGAAT CCACATCCAT GCAGGCGACA
TTGCTGGACA ATATCATCGC CCATCACGCG GACCCCAACA ATCCAGACGA ATTCGCAAGC
AAGGAAGGCG GTGACGCGGC GCTCTCCGTG CTTGAGACGC CGTGGTACAA TGACACCATC
GTATACAACT GGATAAATGC CAACAATGGC GCCCCGACCC TGATCATGAA TGCCGATCAG
AACACAGAGA CCCTCGATAC GGCTCTGGCA GACCAGACCA CCATTCAAAA CTTCGCTGCG
GCGTTGATGA ATCAGTCGGA CGCGACCATC GACGACCTGG CCGAGTACAT ACGAGCCAAC
AACGATGGTG GATTGCCCGA AGACGCCAGC GCGGATGACA TCATTGCCTA TTTTCAAAAC
GGGTTCGGGA TTGGCGAAGT GGACCGCAGC AGCGCCACAA CCTTGCGCTT CGTGCCCAAC
GATCTAGGAG ACGGTATCCG GTGGGACAAC CGGATCAACT GGGAGACCGA CGACCTGCCG
GGTACCGTGG ATGGTGACAA TGTCGATCTG GCCGGCAATT GGGTCACCTA CGGGACGCTG
ACCACTGAAA TTGCTGATTT CGACATGGGC TCCGGTGGAC AGCTGAATGT GACCAGTGGA
CGGCTCGATG TGACTGGCGA GACCAGCGTC GGCGAAGATG GTGGGGACAT CGACGTGGAC
AATTCCGGTC AGCTTTGGAT GGCTGGCTAC GGAGACACTG ACCGCTTCTC CATCGATGTC
ATAGATGGCC GCTTCGCCAA CACCGGAGAC TTCAACGGCA CTGCCGACAT CAACGTTACC
GATGGCCAGG CGATCCTCGC CACCTCGGGG GCCAATATGA CCCTTGGCGC TGACAGCCAC
CTGATCATCA ACGGAGGTAA GGCCAAGGTC GGCTTCGACG GAGATGATGG CGGCATCGCG
ACGCTTCAGA TGGAGGGTGG CAACATCAAC TTTATTGCTG ATGAAACCGG TTTTTCGACG
ATCGAAGAAA CCCGCTCGGG TGCCTTCGGG GACGAACCCG ACGTTCTGTC AGGAATTGAT
CTGGGCGAAG GTGTGCTCGG CATCGATATC ACAGCCCTCA ACGGAAGCGC GCTCGAGCAG
GTCTTGCTTG GCGCCGATGA AATCCTGGGC AGCTTTGACA GCATCGAACT GGTCGGTCTG
GGCAATGATC AAGATGCCAC CATCACCTTC GACTACGACA AAGACGAGGT AACGTTCCGT
GTCACGCAAG CCGGTGACGG AACCGGAAAA GCCTCGACGG AATTCGTGGG CGACATGATG
GATGCGCAGA CCGAAGCCGC TGATCTATGG GCTGCTCTGA CGGACGGGCA GGGGACCTAT
GAGGACATTG AAGAGCCCGA GATCGAACAG CTGGACGAGC TCTCGAGCCT AGTGGCCTGA
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| Protein sequence | MASRFTSLFE MLNTRRTALV LGSTTMVAGC VSGGGETPTE EPAVETSNVA QGPQLAADPL
FQIPMITQPD PVSIPAEPRV SEPTPPKDPS ITPEAPAPSP PPSPPVAAPE PEPPEPPNPP
VAAPEAEDSA DSAPQTSGAI LIEANLAVAG GRVALLETGE ENIRSIEILN GPDIGNLTVN
PDNTLALVLS GTDHSGPLSF SYNVTYDDGT TKFFEQTVDV APLTQLEGWS SGEKLYMLET
DDNGDLLIEH GDVHQKVYIS GSSDALSRDD IAEKEGIAPA DIDMMWLLDH PEYGATPEMA
LDVEMGMEMW SGLTAFTFNE TGVGPLRLDA EPGSHWLLFE KGYEYEVERL IYEDSEGESA
LHPLVVTSYG EGEDPIINSD VMIFQSPSEN IVINGLALTG GLSDFATTNL ILDDMTFTEN
GISIRGSEGV TLRNSSIYDA VDKHPFTDDE WVAGWDKNSG IWVGSTDGLL MEDLFFDRNG
WSPDYRYDMS TEGGLPPNMF SHNIYIQFDN TDVTFRDNIT MRGASYGAQF RSGGLVEDNV
YLDNNGATNL QGGKYLDDDT KYLNFILFTD NVITSAGDKD ALDQIGARSA GVESTSMQAT
LLDNIIAHHA DPNNPDEFAS KEGGDAALSV LETPWYNDTI VYNWINANNG APTLIMNADQ
NTETLDTALA DQTTIQNFAA ALMNQSDATI DDLAEYIRAN NDGGLPEDAS ADDIIAYFQN
GFGIGEVDRS SATTLRFVPN DLGDGIRWDN RINWETDDLP GTVDGDNVDL AGNWVTYGTL
TTEIADFDMG SGGQLNVTSG RLDVTGETSV GEDGGDIDVD NSGQLWMAGY GDTDRFSIDV
IDGRFANTGD FNGTADINVT DGQAILATSG ANMTLGADSH LIINGGKAKV GFDGDDGGIA
TLQMEGGNIN FIADETGFST IEETRSGAFG DEPDVLSGID LGEGVLGIDI TALNGSALEQ
VLLGADEILG SFDSIELVGL GNDQDATITF DYDKDEVTFR VTQAGDGTGK ASTEFVGDMM
DAQTEAADLW AALTDGQGTY EDIEEPEIEQ LDELSSLVA
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