| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4261 |
|---|
| Symbol | |
|---|
| ID | 3932413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007801 |
|---|
| Strand | + |
|---|
| Start bp | 51357 |
|---|
| End bp | 52247 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637902318 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_512201 |
|---|
| Protein GI | 89057747 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0752478 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACAG CAACCATCGA ACTCGCCAAT GGCGACTATG ATATCGTTAT CGACGGCACG
CCAAGCACGG TCACGGTTCC CGTTTTGACT GCTGGCAGCA TTCTGGAGGC CACCCCAGAA
ATCGGCGACA CCTTGACGGT CACAGGATCC AATGCCAGCG CCACGGCAAC CTTCCAGTGG
CAGAAAGACG GTGCGGATAT TAGCAGCGCA ACGAGTGCAA GCTACGACAC CATATCTGAC
ACGGCGGGCG TTTATCGGCG GGGCGTGTCG GACGGTGCGC AGGGGCCTGT GTATACGAGC
GCAGTAACGG TTGCCGGAGT GGCCGGAGGC ACAGAATACG TCACCGATTT CGTCGAAGAA
TTCAACGACA CTGGCCCCAT CAACATTGTC ACGCTTGCAG AATGGTCCTC GCAGGGCGGC
AGCGGCGGTG ACAACTCCGG CCTGATCGTC AATGGTGGCA GTGTCAGTCA ACCCGCCAGT
GCGTCTGGAT CGGCCAGCTT TGCCCGAGCA CGGCACGCAA AGACGGCCAC CACGCAGAGC
CGCGCGACAC TCGACATCTC GCAGGTTGGC TCCGGTGGCG CGTCACTGAC GCTGCATTTC
GCCAACGGAT CGGTATGGGC CTACATCCGC GTGGATGCGA ACGGACGCAT AAACTTCTTG
GGCAACGGCT TCTCCGCTGC GTTCACGGGG GTTGGCGCCT TTTCCTCGCC GGGTTCTCTT
GCGGTCGAGT TTGATGGATC TGACCTAATC GCCTACAACA ATGGAAGCGA GGTTCTGCGC
CGGACTTGGG CCGTTGACCT TGGCACCTCC ATCGGAATCG AAGCGCGGAC GGGGGTTGGC
GAGATGCCAT TCATGATCGA GCAACTTTTG GTCGAAAGAT TCCAGCCATG A
|
|---|
| Protein sequence | MPTATIELAN GDYDIVIDGT PSTVTVPVLT AGSILEATPE IGDTLTVTGS NASATATFQW
QKDGADISSA TSASYDTISD TAGVYRRGVS DGAQGPVYTS AVTVAGVAGG TEYVTDFVEE
FNDTGPINIV TLAEWSSQGG SGGDNSGLIV NGGSVSQPAS ASGSASFARA RHAKTATTQS
RATLDISQVG SGGASLTLHF ANGSVWAYIR VDANGRINFL GNGFSAAFTG VGAFSSPGSL
AVEFDGSDLI AYNNGSEVLR RTWAVDLGTS IGIEARTGVG EMPFMIEQLL VERFQP
|
|---|
| |