| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4258 |
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| Symbol | |
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| ID | 3932410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | - |
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| Start bp | 49043 |
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| End bp | 49867 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637902315 |
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| Product | WecB/TagA/CpsF family glycosyl transferase |
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| Protein accession | YP_512198 |
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| Protein GI | 89057744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.134206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCT CTTCTCAAAA AATGCCCATG ATGACCTGGT CCCCGGCCGA AGGCGATCTG
CCGTTGGTCA AGGTCACAGT ACCGAACCGT GCGGCATTTC TGGACGACCT GCGCGCGCAC
CTTGTGGCGG GATCTGGATT TGCGGTGGCC ACCCTCAATC TTGACCACGT GGTGAAGCTG
CACCGAGATC TGACCTTTCG TGCGGCCTAC GCCGCCCATG ATTACGTTAC CGCCGACGGC
CGCCCGATTG TGTGGTTGTC GCGTCTTGCG GGAAGTCCGG TGGAGCTGGT GACAGGTTCG
GATCTAATGG AGCCTCTCTT CGCGCTGGCT GCCGAGACAA AGACGCCTGT GGCGTTTTTT
GGCTCCTCCC AAGAGGTTCT TGATACGGCT AAGGCACAGC TTGAAGCGCG ATTTGAGGGT
CTGAACATAG AGGCCGCCAT TGCACCGCCT ATGGGCTTTG ATCCGATGGG CCCCGATGCT
GACATGCGGA TTGCAGAGCT GGATCAATCG GGTGCCCGGC TTTGTCTGCT AGCCTTTGGG
GCTCCAAAGC AAGAGATCTT CGCGGCCCGT GCAACCGCCG CCTTGCCGCA TATGGGGTTT
GTTTCGATCG GGGCCAGCCT TGATTTTATT GCGGGGGCTC AGAAACGCGC GCCCCGTCTT
GTCAGGGTCC TTGCTGCGGA ATGGTTATGG CGCATGCTGA GCAACCCTCG CCGTATGGTA
AGCCGCTATA TGGCTTGTTT GGGTATCTTG CCGACATTGA CGGGCGAAGC CCTTCGACTT
CGGTGGCGCG CCTCCGAGGA GGAGACGCCG CGCGATGATG TTTAG
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| Protein sequence | MSVSSQKMPM MTWSPAEGDL PLVKVTVPNR AAFLDDLRAH LVAGSGFAVA TLNLDHVVKL
HRDLTFRAAY AAHDYVTADG RPIVWLSRLA GSPVELVTGS DLMEPLFALA AETKTPVAFF
GSSQEVLDTA KAQLEARFEG LNIEAAIAPP MGFDPMGPDA DMRIAELDQS GARLCLLAFG
APKQEIFAAR ATAALPHMGF VSIGASLDFI AGAQKRAPRL VRVLAAEWLW RMLSNPRRMV
SRYMACLGIL PTLTGEALRL RWRASEEETP RDDV
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