| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4247 |
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| Symbol | |
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| ID | 3932399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | + |
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| Start bp | 36261 |
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| End bp | 36983 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902304 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_512187 |
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| Protein GI | 89057733 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.432694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGG TGAAAGCACT TCTGCTTGCA GGCGGGCTTG GCACACGGCT CAGGCCGCTG
ACCGACACCC TGCCGAAATG CCTGATCCCA GTGGCGGGCA AACCGATACT TGATTACTGG
CTTGATGCGC TGGACGCGGC CGACATCCGG CAGGCGCTTC TCAACACCCA TCACAAGCGC
GATCAGGTCA AAATCTGGCT CGAAACCGCC AATTCGAGCC GAAATGTAGC CATCGCGGAG
GCCTATGAAC CCGAGCTTCT GGGCTCTGCC GGCACGGTCA CCGCAAACCG CGATTGGGCC
GATGATGCCA GCGAGGTCGT GGTGATCTAT GCCGACAACC TTTCCGACAT TGATCTGGGC
GCCCTGGTGG CGTTCCACCG CACCCATTCC GACCCGATGA CGATGATGCT CTTTCACACA
CCCTATCCGT CAAAATGCGG CATCGCGACG CTTGATGATG ACGCGCGCGT GACCGCCTTT
GTCGAAAAGC CGGATCAGCC CGAAAGCGAT CTGGCCAATG CCGGGCTCTA CGTGCTTGAT
GCCAGCGCCT GGCGCGAGAT TGCCGATATG GGCGCGTTCG ATTTCGGGTT CGATGTGATC
CCCGCCTTCG TGGGGCGGAT GCGCGGCTAT GCCCATCCCG GATATCACCG CGATATCGGC
ACCCACGAGA GCCTTGCCCA GGCCGAGGCC GACGCCCCTG TCGTGTTCGG GCCAGCGCCG
TGA
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| Protein sequence | MAEVKALLLA GGLGTRLRPL TDTLPKCLIP VAGKPILDYW LDALDAADIR QALLNTHHKR
DQVKIWLETA NSSRNVAIAE AYEPELLGSA GTVTANRDWA DDASEVVVIY ADNLSDIDLG
ALVAFHRTHS DPMTMMLFHT PYPSKCGIAT LDDDARVTAF VEKPDQPESD LANAGLYVLD
ASAWREIADM GAFDFGFDVI PAFVGRMRGY AHPGYHRDIG THESLAQAEA DAPVVFGPAP
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