| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4246 |
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| Symbol | |
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| ID | 3932398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | + |
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| Start bp | 35136 |
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| End bp | 36257 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902303 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_512186 |
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| Protein GI | 89057732 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.466913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TGATCACGGG CGGGGCCGGG TTCATCGGTT CGCATACCGC CGATGCGCTG
CTGGCCCTCG GTCACGAGGT GCGCGTGCTC GATATCCTGC AGGAGCCCGT GCATCGGGGG
GGGGCATGGC CGGCCTATCT GGATCCCGCC ATCGAACGTA TTCAGGGCGA CGTCCGCGAC
GAGGCGGTGT TGCTTGACGC GCTTAGGGGC GTCGATGCGG TCTACCATCT GGCCGCCTTT
CAGGATTACC TGCCGGAATT CAGCCGCTTT TTCTCGACCA ATGTCACCTC GACTGCCCTG
ATCTACGAGC TGATCGTGCG AGAGAACCTG CCCATTCAGA AGGTCATCGT GGCCTCAAGC
CAGGCAGCCC TTGGCGAAGG TCTTTATCTT GATGCCCACG GCCAGCGGGT TTTGCCGGGC
CTGCGCCGTG ATGCGGATCT GCGGCGCGGT GTGTGGGACA TCCAACCCGG CCCCGGCCAG
GCGGGCCCTC TCACCTATCA GCCCACCGAT GAAAGCGTCG CCAACCCGCA AAACTGCTAT
GGCACCTCCA AGATCGCGCA GGAAAACGCC GCCCTGAACC TTGGGCGGAT GTATCAGATC
CCGACTGTGG CGATGCGCTA TTCCATCGTG CAGGGCCCGC GCCAAAGTCT CTATAATGCC
TATTCGGGAG CGTGCCGGAT ATTTTCGCTG TCTTTCCATC TGGGGCGCGC GCCGGTGATC
TACGAGGACG GCGCGCAAGT GCGTGATTTC GTCAATTACC GCGATGTGGT CGATGCCAAT
CTCTGCGTGC TGACCGACAC CCGTGCCGAT TACGAGATGT TCAATGTGGG CGGCGATGCG
CCCGTCTCCG TGTCTGAATT TGCCTCTGTC GTGGGCGAGG TCTTCCAGCA TGACGGCTAC
ATGCCGACCG CGTCAGGCAA GTACCGCTTC GGCGACACAC GGCATATCCT GTCAGACGTC
TCGAAACTGA AGGCCCTTGG CTGGCGGCCC ACCCGGTCAT GCCGTGACAG TGTTACCGCC
TATCGCGACT GGATGGAAAA CGCCGCCCCG CCCGCCGAAA TCCTTGAGCA ATCCGAAAAA
ATGATGGCCG CGCTTGGCGT TGTCCGCACG GTGGGAGGGT AG
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| Protein sequence | MKILITGGAG FIGSHTADAL LALGHEVRVL DILQEPVHRG GAWPAYLDPA IERIQGDVRD
EAVLLDALRG VDAVYHLAAF QDYLPEFSRF FSTNVTSTAL IYELIVRENL PIQKVIVASS
QAALGEGLYL DAHGQRVLPG LRRDADLRRG VWDIQPGPGQ AGPLTYQPTD ESVANPQNCY
GTSKIAQENA ALNLGRMYQI PTVAMRYSIV QGPRQSLYNA YSGACRIFSL SFHLGRAPVI
YEDGAQVRDF VNYRDVVDAN LCVLTDTRAD YEMFNVGGDA PVSVSEFASV VGEVFQHDGY
MPTASGKYRF GDTRHILSDV SKLKALGWRP TRSCRDSVTA YRDWMENAAP PAEILEQSEK
MMAALGVVRT VGG
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