| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4218 |
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| Symbol | |
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| ID | 3932370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | - |
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| Start bp | 5297 |
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| End bp | 6871 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637902275 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_512158 |
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| Protein GI | 89057704 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.245286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTG CGAACCAGTA TGAATGGCAG ATGCTTGCTC TGATCAACGC CGAACGGGCG
AAGGTGGGTG CCGATCCTCT GCGCCTTGAG ATCACACTGA ACCTTGCGGC TGAGAACCAT
AGCGACTGGA TGATCGCGAC GGACACGTTC TCCCACACCG GTGTTGGCTC CTCCGACCCC
GGCGTTCGCA TTGAAGCCGC CGGGTTTGAC GCGTCACGCG GCTACGGTTG GGCCGAGAAT
ATCGCCGCAA GAACGCTTGG TGGACCGGCA GGATATGCGG ATGAGATCGT CGGATTGCAT
CAGCAATTGA TGAACAGCCC TGGCCATAGG GCAAATCTCC TGAACCCCGC CTATGATTTC
ATCGGCATCG GCTTTGAAGT TGGCGAATAC CAAGGGCAGA CATGGGCCTT TGTAACGCAG
AAGTTCGTGG TGACAAACGG ATCCGTCGAT GTCGAGACAG CAAACGTTAC AAACTACGAG
CTTCAGTTTA ATTCTGACTT CAATCAGGAC GGCATCATCG GCCTGACGCC AGCAGAAGAG
GCCGCGCAAG CGGGCGCACA GATATATCGG ATGTACCGCG CGACGCTGGA TCGTGAGCCC
GACCTTGGCG GATATGAGCA ATGGGTTCAG GTTCTTAAAG AGGGCACGTC AGGTCTTCAG
GACATCGCTA GCCGATTCAT GGCGTCTGCA GAATTTCAGC AAGTCTACGG TGCTTTGAGC
GATACTCAGT TCGTAACGCT CCTTTACAAT AACGTGCTGG ATCGTGCCCC TGACAGTGCC
GGGTTGGAAA GCTGGGTGTC CCTCCTCAGC GGTGGAGCCG ATCGCGCACA GGTTGTCCTG
GGGTTTTCAG AAAGTGCCGA GTTCGCAAAT ACATCCAGTG ACGCGGCAAA TGCCTATACC
GGCGCTCTGG CGGCACGTCA TGAAACGTCT TTTCTGGACG ACGTGTTCCG TCTGTACCAG
GCCACCCTGG GTCGAGAGCC TGATAGTGGG GGTTTGCAGG GTTGGACGGA GCAATTGGCC
GAAGGGAAAG ACTATTTGTC TATCGTGTCC GGCTTCACCA ACTCCCCGGA ATTTGTGAAC
ACCTACGGAT CATTGACAGA CGAAGCCTTC GTAGACCTGA TGTACCTCAA CGTCCTGAAC
CGAGGCGCAG ATTCAGCTGG TCAACAACAT TGGCTCAATC TTATCGGCAG CGGTGGCACA
CGCGAGCAGG TCGTGCAGGG GTTCGCGCAA AGCGCCGAGT TTATAACCAA CACCGAACAG
AACTTCACGA CCTACATGGG CTCTTTGGAG GGCGACGTTC TTTCAGGGAA CACAGGCGAT
GACATACTCC TGAGCGGCTA TACGGCCGAT ACCTTCGTGT TCGATGCAGA CGAAGACGGC
AAAGACACTG TGCTGCAGTT CGATGCATGG GACACGCTTC AGTTCGAGGG GTTTGGCTAT
ACCAAAGCAT CCGATGCATT GGCACACATG CAAGCGTCCG GATCGAATGT GATGTTCTCT
GACCAAGGCG TTGACATAAC GTTCTTCGGA ACCGACCTTT CCGTGCTTGA ACAAGCGGAC
TTCATCTTCG CCTGA
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| Protein sequence | MSFANQYEWQ MLALINAERA KVGADPLRLE ITLNLAAENH SDWMIATDTF SHTGVGSSDP
GVRIEAAGFD ASRGYGWAEN IAARTLGGPA GYADEIVGLH QQLMNSPGHR ANLLNPAYDF
IGIGFEVGEY QGQTWAFVTQ KFVVTNGSVD VETANVTNYE LQFNSDFNQD GIIGLTPAEE
AAQAGAQIYR MYRATLDREP DLGGYEQWVQ VLKEGTSGLQ DIASRFMASA EFQQVYGALS
DTQFVTLLYN NVLDRAPDSA GLESWVSLLS GGADRAQVVL GFSESAEFAN TSSDAANAYT
GALAARHETS FLDDVFRLYQ ATLGREPDSG GLQGWTEQLA EGKDYLSIVS GFTNSPEFVN
TYGSLTDEAF VDLMYLNVLN RGADSAGQQH WLNLIGSGGT REQVVQGFAQ SAEFITNTEQ
NFTTYMGSLE GDVLSGNTGD DILLSGYTAD TFVFDADEDG KDTVLQFDAW DTLQFEGFGY
TKASDALAHM QASGSNVMFS DQGVDITFFG TDLSVLEQAD FIFA
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