Gene Jann_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4216 
Symbol 
ID3932368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007801 
Strand
Start bp2778 
End bp4175 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content66% 
IMG OID637902273 
Productphosphoglucomutase/phosphomannomutase alpha/beta/subunit 
Protein accessionYP_512156 
Protein GI89057702 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCTA AGTTTGGAAC GTCTGGCCTA CGCGGTCTGG TCGTGGATCT GACTGATGCG 
TTGGTCAGCG ATTATGTGCG GGCGTTTCTT GCGGCCTGTG ACATAGGCGG TAGTCTGTGC
GTCGGGCGCG ATCTGCGCAG CAGTTCACCC CATCTGGCGG GGGTCGTGGC GGAAGCGGCT
CGCGCACAGG GCGTCGCGGT GACCGATTGC GGGGCCTTGC CCACCCCCGC GCTTGCCCTC
GCAGCGGCTC AATCGGGCTG CGGCGCGGTG ATGGTGACGG GCAGTCACAT CCCCGATGAT
CGCAACGGGC TGAAGTTCTA TTCCTTGCAG GGCGAGATTA CCAAAACCGA TGAAACCGCG
ATCCTTGCCG CCCATGATGC GCCCGCCGAG ACACCCCCAT CCGACCCGGC CCCCCTGTCC
CGAGATACGG AGGCAACGGG CCGGTTCCAC GCCCGGTATC TTCGGGCCTT TGGGGCAGGG
GCGCTGGCAG GGGCACGGAT TGGCGTCTGG TCCCATTCCT CGGTCGGGCG TGATCTGCTG
ATCGGGCTGT TGCGTGATCT GGGGGCGGAG GTCACAGATC TGGGCCGCTC GGAGGTCTTC
GTGCCGGTCG ATACCGAAGC CGTGGACGCC CCCACCCGGG CCCGTCTGCG CGATTGGGCG
GCAGAGGGCG GGTTCGATGC GATCGTTTCC ACCGACGGCG ATGCCGACCG CCCACTTCTG
ACCGATGCCA CCGGAGAGGT CGTGCCCGGC GATGTCATGG GCCAGATCAC CGCCCAATAT
CTTGGGGCAG ACGTGGTCGT GACGCCTGTG TCCTCCAATG GCGGCGTCGA ACTTGGCGGC
GGCCTCCGTG TGGTCCGTAC CAAGATCGGA TCGCCCTTCG TGATTGCAGC GCTGGAAGAC
CTCTCGGGCC AGCGCGCCGT GGGATACGAG GCCAATGGCG GGTTCCTTCT GGGGTTTGAG
GCCCGGAGCT TCATGGCCCC CTTGGCCGCT TTGATGACCC GCGATTGCGT TCTGCCGATC
CTGTCCACAT TGATGGCTGC GCGGGGGCCT GACGGGCGCA TCGACGTGGG GACCCGTGTG
GCGCAGGAGC CCGCGCGCTT CACCGCGGCG GATCGGATCA CGGAGATGCC CGTTGCCACC
TCAAATCAGA TCCTAAACCG CTTGTTAGAG ACTGATAATG CCCGGGCGGT GCTGCTGCAG
GACGTCGGTC TGTCGCCGGA GCACAGCATA GAGACCACCG ATGGTCTGCG CATGACGGAC
CAAACCGGCG CCGTCCTGCA CCTCCGCCCC TCAGGCAATG CCCCGGAATT CAGGGTCTAT
ATCGAGGCCG ATGACCCCGC TGCGGCTCAG ACCCTGCTGG CCCGGGCACT GACGGTAATC
AACAAGATGA AGGCTTAG
 
Protein sequence
MPPKFGTSGL RGLVVDLTDA LVSDYVRAFL AACDIGGSLC VGRDLRSSSP HLAGVVAEAA 
RAQGVAVTDC GALPTPALAL AAAQSGCGAV MVTGSHIPDD RNGLKFYSLQ GEITKTDETA
ILAAHDAPAE TPPSDPAPLS RDTEATGRFH ARYLRAFGAG ALAGARIGVW SHSSVGRDLL
IGLLRDLGAE VTDLGRSEVF VPVDTEAVDA PTRARLRDWA AEGGFDAIVS TDGDADRPLL
TDATGEVVPG DVMGQITAQY LGADVVVTPV SSNGGVELGG GLRVVRTKIG SPFVIAALED
LSGQRAVGYE ANGGFLLGFE ARSFMAPLAA LMTRDCVLPI LSTLMAARGP DGRIDVGTRV
AQEPARFTAA DRITEMPVAT SNQILNRLLE TDNARAVLLQ DVGLSPEHSI ETTDGLRMTD
QTGAVLHLRP SGNAPEFRVY IEADDPAAAQ TLLARALTVI NKMKA