Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4215 |
Symbol | |
ID | 3932367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007801 |
Strand | + |
Start bp | 1874 |
End bp | 2608 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902272 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_512155 |
Protein GI | 89057701 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAAGGG CCGGTTTGAT CCATAGTCTT GCGTCCCGGC CCCAGACTTG GCACAGCACC GCCATGGACA GTGACGGCTA TGAAATTGAA ACCCATGTGG GCCGCCGCCG CGCCATGCGT TATCATTTCT GGATCGACCA CGAGATCCTG CGCTACCCCT GGACCAATTT CGACGAAATC GCCCCCGGTG TGTTCCGCTC CAACCATCCC ACGCGCGCCC GCTTCAAGGC TTATGCGGAG CGTGGGATCA AAACCATCCT CACCCTGCGT GGCGGGGAGG ACCGGCCCCA TCATCTGCTA GAGGTGGAGG CTTGCCGCGA TTTTGGCCTG ACCTTTGAAT GTGTTCCGAT GTCCGCGCGC CATGCCCCCA CGGTGGCGCA GTTGAGCGCC GTGTTCGAGG TCCTGGACCG GATCGAGCGT CCGTTCCTGA TACATTGTAA ATCTGGCGCG GACCGCACCG GGTTGGTCTC GGCAATCTAT CTGATGCACT ATGAAAACAT CCCCTTTGAC CAGGCACGGG TGCAGCTGAG TTTCCGCTAT ATTCATATTC GGCGCAGCCA GACCGGGATC CTGGACGTTT TCCTGGAAGC CTTCGCCGCG CGCCATGCCG AGACCGGCAT CGGCATCCGC GACTGGATCA TGACCGAATA TGACGAGGCC GCGCTGACGG CATCCTTTGA CCAACGCCAG CGCAATCTTT GGCCCTGGGA AGGGTGGCGC TCGGGCGTGT CTTGA
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Protein sequence | MLRAGLIHSL ASRPQTWHST AMDSDGYEIE THVGRRRAMR YHFWIDHEIL RYPWTNFDEI APGVFRSNHP TRARFKAYAE RGIKTILTLR GGEDRPHHLL EVEACRDFGL TFECVPMSAR HAPTVAQLSA VFEVLDRIER PFLIHCKSGA DRTGLVSAIY LMHYENIPFD QARVQLSFRY IHIRRSQTGI LDVFLEAFAA RHAETGIGIR DWIMTEYDEA ALTASFDQRQ RNLWPWEGWR SGVS
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