Gene ECH_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_1149 
SymbolsecA 
ID3927909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp1169188 
End bp1171776 
Gene Length2589 bp 
Protein Length862 aa 
Translation table11 
GC content32% 
IMG OID637902263 
Productpreprotein translocase subunit SecA 
Protein accessionYP_507933 
Protein GI88658327 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.498004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGTA TTGCACACAA GATCTTTGGC TCAACAAACA GCAGGATAAT AAAATCATTT 
CATAAAGTAG TTCAGGATAT AAATGCAATA GAACATGAGA TTCAACTTCT TTCTAATGAA
GCATTAAAAC ATAAAACCAT AGAATTCAAA GAAGAACTCA AAAATGGAAA AACCTTAGAT
GATATTCTAG TACCAGCCTT TGCTGTGGTA AGAGAAGCCT CAAAAAGAGT ACTAAATATG
AGGCACTTTG ATGTACAGCT TATAGGTGGA ATAGTCCTAC ATAAAGGAAT GATATCCGAA
ATGAAAACGG GCGAAGGAAA AACTTTAGTA GCAACACTAG CTGCATATTT AAATGCATTA
GAAGGAAAAG GAGTTCATAT AGTAACAGTA AACGATTATC TAGCAAAACG TGACGCTGAA
TGGATGGGAG AATTATACAG TGCATTAGGA ATAACAGTTG GATGTATACT CACTGAAACA
AATGACTTAG AAAGAAAAAA CGCTTATAAC TGTGACATAT TATATTCAAC AAACAATAAC
CTAGGCTTTG ACTATTTGCG TGATAACATG AAATTTTCTA GAGATGAAAT GGTGCAAAGG
GGATTTAATT ACGCAATAGT CGATGAGGTC GATTCAATAT TAATAGATGA AGCAAGAACT
CCACTAATAA TCTCCGGACA AGTCGACCAA GATATCAAAA TGTATAAAAA AATAGATAAT
CTGATATATG AATTAGCAGA AGAAGATTAT GAACTAGAAG AAAAAAACAG AAATATCTTT
TTAACTGAAG CCGGAATAAC AAAAATTGAA AATTTATTAA TCCAGCATAA TCTTATTTCT
TCCAATACAT CTTTATACGA CATAGATAAC ATCATAATCA TGCACTACAT CACTCAAGCA
TTACGTGCGC ATAAAATGTT TGCTGTAGAT AAAGATTATA TAATTAAAGA CGGCAACATA
GTAATTATAG ATGAATTCAC AGGCCGTATG ATGGATGGAA GAAGATATTC AGACGGATTG
CATCAAGCCC TTGAAGCAAA AGAAAAATTA AATATCAATA GTGAAAACCA AACACTAGCT
TCTACTACAT TTCAAAATTA CTTCAGAATG TACACAAAAC TCTCTGGCAT GACAGGCACT
GCAGAAACTG AGTCAGAAGA ATTCTTAGGA ATATATAACT TACAAGTTGT ACAAATTCCA
ACAAATATAC CTGTTCAAAG AATAGACTTA AATGACGATA TATATTGTAC AGAAGAAGAA
AAATTCAATT CCGTCATAAA ATTTATTTCA GAATGTCATA AAAAACTACA GCCTGTACTA
GTAGGAACAG TCAGTATCGA AAAATCAGAG ATGCTATCTA AACTATTAAC AAAAAATAAA
TTAAAACACT CTGTATTAAA TGCACGTTAC CATGAACAAG AAGCGTATAT AATAGCACAA
GCCGGCATAC CTGGAACAAT CACAATTGCT ACAAACATGG CTGGTCGAGG TACAGATATA
CAGCTTGGAG GAAATTTAAA AATGCTAGCA AAAACAGCAC TTGCTAACAT TACAGACAAA
GAAGCAATAG AAATAAAATA CAAACAACTC ACAGAAAAAG TAAACAGAGA TAAAGAAATA
GCAATACAAG CTGGAGGGTT ATGTGTAATT GGCACAGAAC GTCATGAAAG CAGAAGAATT
GACAATCAAT TAAGAGGAAG ATCTGGTAGA CAAGGAGATC CAGGGCTATC CAAATTTTTC
TTATCATTAG AAGATGACTT ATTAAGAATA TTTGGCTCAG ACAAAATAAA AGGAGTTCTT
CAAAAGCTAG GCATGAAAAA AGATGAAGCT ATTCAACACA CATGGATAAG CAGATCTATT
GAAAAAGCAC AACACAAGGT TGAGTCAAGA AATTACGATA TTAGAAAATC TCTATTAAAG
TTTGATAATG TAATCAATGA ACAAAGAAAA GTTGTTTTCG ACCAAAGAAA TAAAATTTTA
GATAGTGATT CCTACGATAT TTCAATCATA TATAGAGATC TCAATAGTGA TATAGTAAAT
AGTATAATAC ATGACAAGTA CTACAATTTA GACGATGATA CATATAAAGC ATTATCATCT
GAATTCACAA GAATATACAA TATCACCTTG GATTACAGCA CTATCAGTAA TTTCGAAAGT
AAAGACAAAG TTTTAGAACA TCTAAACGAA ACTGTTGATG AACATTTTGC ACAAAAAATA
GAAGAATTTA CATTAAAAGA TCAAAAAGCA TGGGACCATG TAGTAAAAAA AGTCATGATA
ATGTCATTAG ATTACTTATG GAGAGATCAC CTTGCTGCAC TAGATAGTTT AAAATGTGGG
ATAAACTTAA GATCCATAGC ACAAAAAGAC CCATTAAATG AGTTTAAAGC TGAAGCATTC
TCTATGCTTG AGAATATGAT GAGCAAGTTT TATGAACTAA TAATACAGAG ATTATCCCAT
TTGAAGTTTG ATATAGAGTT AAATGATACA CAAAGAATAG AATATAATAT CCATCATTCC
AAAATTTCAC GTAATGAAAA GTGCCCATGT GGATCAGGAA AAAAATTCAA ACATTGTCAT
GGTGCTTAA
 
Protein sequence
MLSIAHKIFG STNSRIIKSF HKVVQDINAI EHEIQLLSNE ALKHKTIEFK EELKNGKTLD 
DILVPAFAVV REASKRVLNM RHFDVQLIGG IVLHKGMISE MKTGEGKTLV ATLAAYLNAL
EGKGVHIVTV NDYLAKRDAE WMGELYSALG ITVGCILTET NDLERKNAYN CDILYSTNNN
LGFDYLRDNM KFSRDEMVQR GFNYAIVDEV DSILIDEART PLIISGQVDQ DIKMYKKIDN
LIYELAEEDY ELEEKNRNIF LTEAGITKIE NLLIQHNLIS SNTSLYDIDN IIIMHYITQA
LRAHKMFAVD KDYIIKDGNI VIIDEFTGRM MDGRRYSDGL HQALEAKEKL NINSENQTLA
STTFQNYFRM YTKLSGMTGT AETESEEFLG IYNLQVVQIP TNIPVQRIDL NDDIYCTEEE
KFNSVIKFIS ECHKKLQPVL VGTVSIEKSE MLSKLLTKNK LKHSVLNARY HEQEAYIIAQ
AGIPGTITIA TNMAGRGTDI QLGGNLKMLA KTALANITDK EAIEIKYKQL TEKVNRDKEI
AIQAGGLCVI GTERHESRRI DNQLRGRSGR QGDPGLSKFF LSLEDDLLRI FGSDKIKGVL
QKLGMKKDEA IQHTWISRSI EKAQHKVESR NYDIRKSLLK FDNVINEQRK VVFDQRNKIL
DSDSYDISII YRDLNSDIVN SIIHDKYYNL DDDTYKALSS EFTRIYNITL DYSTISNFES
KDKVLEHLNE TVDEHFAQKI EEFTLKDQKA WDHVVKKVMI MSLDYLWRDH LAALDSLKCG
INLRSIAQKD PLNEFKAEAF SMLENMMSKF YELIIQRLSH LKFDIELNDT QRIEYNIHHS
KISRNEKCPC GSGKKFKHCH GA