Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_1149 |
Symbol | secA |
ID | 3927909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 1169188 |
End bp | 1171776 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637902263 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_507933 |
Protein GI | 88658327 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.498004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGTA TTGCACACAA GATCTTTGGC TCAACAAACA GCAGGATAAT AAAATCATTT CATAAAGTAG TTCAGGATAT AAATGCAATA GAACATGAGA TTCAACTTCT TTCTAATGAA GCATTAAAAC ATAAAACCAT AGAATTCAAA GAAGAACTCA AAAATGGAAA AACCTTAGAT GATATTCTAG TACCAGCCTT TGCTGTGGTA AGAGAAGCCT CAAAAAGAGT ACTAAATATG AGGCACTTTG ATGTACAGCT TATAGGTGGA ATAGTCCTAC ATAAAGGAAT GATATCCGAA ATGAAAACGG GCGAAGGAAA AACTTTAGTA GCAACACTAG CTGCATATTT AAATGCATTA GAAGGAAAAG GAGTTCATAT AGTAACAGTA AACGATTATC TAGCAAAACG TGACGCTGAA TGGATGGGAG AATTATACAG TGCATTAGGA ATAACAGTTG GATGTATACT CACTGAAACA AATGACTTAG AAAGAAAAAA CGCTTATAAC TGTGACATAT TATATTCAAC AAACAATAAC CTAGGCTTTG ACTATTTGCG TGATAACATG AAATTTTCTA GAGATGAAAT GGTGCAAAGG GGATTTAATT ACGCAATAGT CGATGAGGTC GATTCAATAT TAATAGATGA AGCAAGAACT CCACTAATAA TCTCCGGACA AGTCGACCAA GATATCAAAA TGTATAAAAA AATAGATAAT CTGATATATG AATTAGCAGA AGAAGATTAT GAACTAGAAG AAAAAAACAG AAATATCTTT TTAACTGAAG CCGGAATAAC AAAAATTGAA AATTTATTAA TCCAGCATAA TCTTATTTCT TCCAATACAT CTTTATACGA CATAGATAAC ATCATAATCA TGCACTACAT CACTCAAGCA TTACGTGCGC ATAAAATGTT TGCTGTAGAT AAAGATTATA TAATTAAAGA CGGCAACATA GTAATTATAG ATGAATTCAC AGGCCGTATG ATGGATGGAA GAAGATATTC AGACGGATTG CATCAAGCCC TTGAAGCAAA AGAAAAATTA AATATCAATA GTGAAAACCA AACACTAGCT TCTACTACAT TTCAAAATTA CTTCAGAATG TACACAAAAC TCTCTGGCAT GACAGGCACT GCAGAAACTG AGTCAGAAGA ATTCTTAGGA ATATATAACT TACAAGTTGT ACAAATTCCA ACAAATATAC CTGTTCAAAG AATAGACTTA AATGACGATA TATATTGTAC AGAAGAAGAA AAATTCAATT CCGTCATAAA ATTTATTTCA GAATGTCATA AAAAACTACA GCCTGTACTA GTAGGAACAG TCAGTATCGA AAAATCAGAG ATGCTATCTA AACTATTAAC AAAAAATAAA TTAAAACACT CTGTATTAAA TGCACGTTAC CATGAACAAG AAGCGTATAT AATAGCACAA GCCGGCATAC CTGGAACAAT CACAATTGCT ACAAACATGG CTGGTCGAGG TACAGATATA CAGCTTGGAG GAAATTTAAA AATGCTAGCA AAAACAGCAC TTGCTAACAT TACAGACAAA GAAGCAATAG AAATAAAATA CAAACAACTC ACAGAAAAAG TAAACAGAGA TAAAGAAATA GCAATACAAG CTGGAGGGTT ATGTGTAATT GGCACAGAAC GTCATGAAAG CAGAAGAATT GACAATCAAT TAAGAGGAAG ATCTGGTAGA CAAGGAGATC CAGGGCTATC CAAATTTTTC TTATCATTAG AAGATGACTT ATTAAGAATA TTTGGCTCAG ACAAAATAAA AGGAGTTCTT CAAAAGCTAG GCATGAAAAA AGATGAAGCT ATTCAACACA CATGGATAAG CAGATCTATT GAAAAAGCAC AACACAAGGT TGAGTCAAGA AATTACGATA TTAGAAAATC TCTATTAAAG TTTGATAATG TAATCAATGA ACAAAGAAAA GTTGTTTTCG ACCAAAGAAA TAAAATTTTA GATAGTGATT CCTACGATAT TTCAATCATA TATAGAGATC TCAATAGTGA TATAGTAAAT AGTATAATAC ATGACAAGTA CTACAATTTA GACGATGATA CATATAAAGC ATTATCATCT GAATTCACAA GAATATACAA TATCACCTTG GATTACAGCA CTATCAGTAA TTTCGAAAGT AAAGACAAAG TTTTAGAACA TCTAAACGAA ACTGTTGATG AACATTTTGC ACAAAAAATA GAAGAATTTA CATTAAAAGA TCAAAAAGCA TGGGACCATG TAGTAAAAAA AGTCATGATA ATGTCATTAG ATTACTTATG GAGAGATCAC CTTGCTGCAC TAGATAGTTT AAAATGTGGG ATAAACTTAA GATCCATAGC ACAAAAAGAC CCATTAAATG AGTTTAAAGC TGAAGCATTC TCTATGCTTG AGAATATGAT GAGCAAGTTT TATGAACTAA TAATACAGAG ATTATCCCAT TTGAAGTTTG ATATAGAGTT AAATGATACA CAAAGAATAG AATATAATAT CCATCATTCC AAAATTTCAC GTAATGAAAA GTGCCCATGT GGATCAGGAA AAAAATTCAA ACATTGTCAT GGTGCTTAA
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Protein sequence | MLSIAHKIFG STNSRIIKSF HKVVQDINAI EHEIQLLSNE ALKHKTIEFK EELKNGKTLD DILVPAFAVV REASKRVLNM RHFDVQLIGG IVLHKGMISE MKTGEGKTLV ATLAAYLNAL EGKGVHIVTV NDYLAKRDAE WMGELYSALG ITVGCILTET NDLERKNAYN CDILYSTNNN LGFDYLRDNM KFSRDEMVQR GFNYAIVDEV DSILIDEART PLIISGQVDQ DIKMYKKIDN LIYELAEEDY ELEEKNRNIF LTEAGITKIE NLLIQHNLIS SNTSLYDIDN IIIMHYITQA LRAHKMFAVD KDYIIKDGNI VIIDEFTGRM MDGRRYSDGL HQALEAKEKL NINSENQTLA STTFQNYFRM YTKLSGMTGT AETESEEFLG IYNLQVVQIP TNIPVQRIDL NDDIYCTEEE KFNSVIKFIS ECHKKLQPVL VGTVSIEKSE MLSKLLTKNK LKHSVLNARY HEQEAYIIAQ AGIPGTITIA TNMAGRGTDI QLGGNLKMLA KTALANITDK EAIEIKYKQL TEKVNRDKEI AIQAGGLCVI GTERHESRRI DNQLRGRSGR QGDPGLSKFF LSLEDDLLRI FGSDKIKGVL QKLGMKKDEA IQHTWISRSI EKAQHKVESR NYDIRKSLLK FDNVINEQRK VVFDQRNKIL DSDSYDISII YRDLNSDIVN SIIHDKYYNL DDDTYKALSS EFTRIYNITL DYSTISNFES KDKVLEHLNE TVDEHFAQKI EEFTLKDQKA WDHVVKKVMI MSLDYLWRDH LAALDSLKCG INLRSIAQKD PLNEFKAEAF SMLENMMSKF YELIIQRLSH LKFDIELNDT QRIEYNIHHS KISRNEKCPC GSGKKFKHCH GA
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