Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_1119 |
Symbol | omp-1M |
ID | 3927996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 1143715 |
End bp | 1144611 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637902233 |
Product | major outer membrane protein OMP-1M |
Protein accession | YP_507903 |
Protein GI | 88658200 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAA TTAATATGAA ACTGTTCTAT CATTTGGATA ATATTATGAC TAAATTCTCA GCTATAGGAA TTGTACTTTC TCTAGTAACA TTATTCGCAT GTAATGTATT TGCATCACCG ATTCCTATTG ATTTCTCTAA TGAAAGCGAA ACAGCTGGGT TTTACGCAAG CGGACATTAC AACATACAGT TCCCTAGATT TAGTCCAATA TCCGTCAAAT ATAAAACAGA TGAAAATACA GAAAAAGAAC TAACTCTATT TACATTAAAA GAAAGTACTG ATACTCCAAC TTTCAAACAG AAAAGTGAGT TCAACGACAA AAAAGGTTAC AGCCCTATAT ACAATAGAAA TTATACAGGA TTTTCAGGAG CTATCGGATA TTCAGGAGGA GGTCTTAGAG TTGAATTAGA AGGAGCATTT ACAAGATTTG ATGTCGATAA ACAAAAATAT AAAAAGGATA ACTATAGATA TTTTGCATTA TGTAAAAAAG ATAGTATAGA GAGTACAGAT AACAGTAATG GCAACCATGT CGTCATGAAA AATGAAGGAT TTAGAGTTAT TTCTTTAACA TTCAATGCTT GTTATGATAT GATAGTTAGT AATTCCTCTT TAGTGCCAAG CGCTTGTATT GGTATAGGGC AAGGAATAAC TAACTTTTTA GGAGGAACAA ACATCCATAC CCTATTTAAA GCAAAACTAG GCTTAGGGTT TCTAATCTCA CCAAAAACTG TTATATTCGC CAATGGGTAT TATGTAAAAA CAAAAGACAA TTCTTTCACT AACCTATCAG TTCAGTACCC CCTTGAACTT AAAGAAGCAC CAAAACATAT AGACCCTATA GCTTGCTTTA ATGCAGACAA CTATGGTGGT GAAGTCGGTC TTAGATTTAT TCTATAA
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Protein sequence | MILINMKLFY HLDNIMTKFS AIGIVLSLVT LFACNVFASP IPIDFSNESE TAGFYASGHY NIQFPRFSPI SVKYKTDENT EKELTLFTLK ESTDTPTFKQ KSEFNDKKGY SPIYNRNYTG FSGAIGYSGG GLRVELEGAF TRFDVDKQKY KKDNYRYFAL CKKDSIESTD NSNGNHVVMK NEGFRVISLT FNACYDMIVS NSSLVPSACI GIGQGITNFL GGTNIHTLFK AKLGLGFLIS PKTVIFANGY YVKTKDNSFT NLSVQYPLEL KEAPKHIDPI ACFNADNYGG EVGLRFIL
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