| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_1114 |
|---|
| Symbol | |
|---|
| ID | 3927888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | - |
|---|
| Start bp | 1136453 |
|---|
| End bp | 1137901 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637902228 |
|---|
| Product | isocitrate dehydrogenase |
|---|
| Protein accession | YP_507898 |
|---|
| Protein GI | 88658075 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02924] isocitrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATTC CAATAACAGT TGCTTATGGA GATGGTATTG GCCCAGAAAT TATGGAAGCT
GTACTATTGA TCTTGAGTGA AGCAGAATCA GGTCTAGTTG TAGAAACTAT AGAGGTGGGA
CACAATTTAT ATAAAAAAGA ATGGTCTTCT GGTATTGCGC CTTCATCTTG GGATTCTATT
TATAGAACGA AAGTACTGCT TAAGTCTCCT ACCATGACTC CACAAGGTCG TGGGCATAAA
AGTCTTAATG TTACGTTGAG AAAGAGATTA GGGTTGTATG CAAATATTAG GCCATGTATT
TCTTATCATC CTGTGATAAA GACAAGGTAT CCTAATCTCA ATGTAGTGAT AGTTCGAGAA
AATGAGGAAG ATACATATAC TGGTATAGAA CATAGGCTGA CTAATGATAC GTATCAATGC
TCAAAAGTTA TTACGAGATC AGGTTCAGAA AGAATATGTG ATTATGCATT TCACTATGCT
AAGGTTCATA ATAGGAAGAG AGTTACTTGC TTGATAAAAG ATAATATTAT GAAAATGACA
GATGGAATTT TTCATAAGTC TTTTTCAAAG ATTGCAGAGA ATTATCCTGA CATTGAATCA
GATCATTATA TTGTTGATAT TGGAATGGCA AAAGTGGCTT CTAACCCTGA AAATTTTGAT
GTTATAGTTA CTACTAATCT TTATGGTGAT ATAGTGTCTG ATATAGTTGC TGAATTATCA
GGGTCTATAG GCCTTGCAGG TAGTGCTAAT ATAGGGAATA ATTATGCAAT GTTTGAAGCT
GTTCATGGTT CAGCTCCAGA TATAGCTGGA AAGAACATAG CAAATCCTTC TGGATTACTT
AATGCAGCTA TACAAATGTT GATGTATTTA AAACAGTTTG ACAAGGCACA GCTAATTTAT
AATGCATTTC TTAAAACTTT AGAAGATGGT ATTCATACAG CAGATATTTA CCAAAGTCAG
GTTAGCAAGA AAAAAGTTTC TACAATGGAT TTTGCTAAGG CTGTTGTTGA AAATTTTGGA
CAATCTCCAT CTCAATTACC AAAATCAATG TTTCAGGATA ATGTAGATAG GACGGGTGTA
TCTTATACAT ATGAACCATC TTATGTTACT AGAGTTCTTG TAGGAGTGGA TATTACTATT
GGTTGTGATG GTGTAGGACT AGATTTTAAG CAGTTAATTA ATAATCTTCA AAATATTACA
CATGATAAAC TGGAGCTTGT GCTAATTCAT AATAAAGGAT TAGAAATTTG GCCTGATGAA
TCTGTGAGTG TAAATCTTTC TTATATGGAT CAGGTATGTT GTAGGTTTTA CATGAAAAGT
AAAGATGATA AAATCATGAA TGAGCATATT AATCAGTTGC TTTTTGACAT AGAGCAAAAG
AAAATAGATG TAGTAAAAAT GGAAAAATTA TACTTATATA ATGATCAACC TGGCTTTTTT
ACTATGTAA
|
|---|
| Protein sequence | MSIPITVAYG DGIGPEIMEA VLLILSEAES GLVVETIEVG HNLYKKEWSS GIAPSSWDSI
YRTKVLLKSP TMTPQGRGHK SLNVTLRKRL GLYANIRPCI SYHPVIKTRY PNLNVVIVRE
NEEDTYTGIE HRLTNDTYQC SKVITRSGSE RICDYAFHYA KVHNRKRVTC LIKDNIMKMT
DGIFHKSFSK IAENYPDIES DHYIVDIGMA KVASNPENFD VIVTTNLYGD IVSDIVAELS
GSIGLAGSAN IGNNYAMFEA VHGSAPDIAG KNIANPSGLL NAAIQMLMYL KQFDKAQLIY
NAFLKTLEDG IHTADIYQSQ VSKKKVSTMD FAKAVVENFG QSPSQLPKSM FQDNVDRTGV
SYTYEPSYVT RVLVGVDITI GCDGVGLDFK QLINNLQNIT HDKLELVLIH NKGLEIWPDE
SVSVNLSYMD QVCCRFYMKS KDDKIMNEHI NQLLFDIEQK KIDVVKMEKL YLYNDQPGFF
TM
|
|---|
| |