| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_1106 |
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| Symbol | secD |
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| ID | 3926985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 1129319 |
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| End bp | 1130836 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637902220 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_507890 |
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| Protein GI | 88658259 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.737656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTA AGTTACAAAT TAAGCCTATA GTTGTGACCT TGTTATGTGT TCTTGCTATA
TATTTAATAC TACCAAATTT TATTAATAGT AAATTTTTGC TGTCAAAACA AAAAGTTAAT
CTAGGATTAG ATCTGCAAGG TGGTGTTTAC TTGTTGTTAG AAGCGGATTT TAAAGAATAT
TTAAAAGAAA GAATGTATAG CTTGTATGAT GAAATGAGTG AATTTTTATC CAGCAAAAAA
ATAGAGTATA GTAAACTAGA TGTAGAGCAG GATAAACTGG TGTTGGTACT AAAAAGTAGT
CAGGATTTTA ATAAAATAAA GTTGTTTGAT AATAAAAACG TTAGAGTATT TGAACAGGAA
GGTCAGATTG TCATGTCTTT TTATGACAGT TATAAGGCAA GTTTGTTGAG GAATGTTATA
TCTGATTCTA TTAGTAACAT AAGACGTAGG TTAGATAAAT CTGGTACAAA AGAGATTATT
ATAAATAGTC ATGGTAAAGA TAGAATCTCT CTGCAAATTC CTGGGGTACA TGATACTAGT
CAAATCAAGA CGTTATTGGG CAAGACAGCA AAGCTGACAT TTCACTTGCT AGAAAATGTT
AGTCAGTTAT CATCTATTAA TCCTCTTACT ACTGTTTTGC TTAAGGATCA TCGTGGAAAT
ACATATCCTA TATTAAAAAA AGTTGAAATT AGTGGTGATT CTTTAATAGA TGTGTCATCT
GGTATAAATA ATCTTGGTAA CGTAGTTGTA CATTTTAAGC TGAATAATGC AGCAGCTAAA
AAGTTTGCTA AAATTACAAA AGAAAACTTT AATAAACCAT TTGCTATAGT GCTGGATGGA
GTAGTACTTA CTGCTCCTAT AATACGTGAA CCTATTTTAA CTGGAAGTGG TGAAATTAGT
GGTAATTTTA CGGTTGAAAC TGCAAAAGAA TTATCTATAT TGTTAAAATC TGGAGCTTTG
CCAGTACCTT TGAAAGTAAT AGAAGAAAAA ACAATAGGTT CTAGTCTAGG TGCTGAATAC
ATTAAGCAAG GTAGATTAGC AATGATAATA TCAATTGTAG CAGTTTCTAT TTTTATTATA
TTTTCTTATC GTATATTTGG TGTTTTAGCT GTAATTGGAT TAGTTTTTAA TATTGTTTTT
ATTATTACCA TACTTACATT GCTTCAAGCT ACGCTTACAT TACCTGGACT TGCAGGAATT
ACTTTGACAG TTGGAATGTC TGTGGATGCT AATGTGTTGA TTTTTGAGCG TATTAAAGAA
GAGTTAAAGT CTACAAAAAA GTTAAAATGG GCTGTAGAAT CTGGCTTTAA AAATGCTATG
TCAACGATAT TTGATTCTAA TGTTACCACA TTAATTGTTG CTGCAATTAT GTTTGTAATA
GGTAGTGGCC CTATTAGTGG ATTTGCTATT ACATTATCAA TAGGTATTTT ATGTTCCATG
TTTTCTGCAA TAACTTTAAC AAAGATGCTA ATAGATTTAT ATATTAGATT ATTTAATTTG
AAGACATTAA GTATATGA
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| Protein sequence | MFSKLQIKPI VVTLLCVLAI YLILPNFINS KFLLSKQKVN LGLDLQGGVY LLLEADFKEY
LKERMYSLYD EMSEFLSSKK IEYSKLDVEQ DKLVLVLKSS QDFNKIKLFD NKNVRVFEQE
GQIVMSFYDS YKASLLRNVI SDSISNIRRR LDKSGTKEII INSHGKDRIS LQIPGVHDTS
QIKTLLGKTA KLTFHLLENV SQLSSINPLT TVLLKDHRGN TYPILKKVEI SGDSLIDVSS
GINNLGNVVV HFKLNNAAAK KFAKITKENF NKPFAIVLDG VVLTAPIIRE PILTGSGEIS
GNFTVETAKE LSILLKSGAL PVPLKVIEEK TIGSSLGAEY IKQGRLAMII SIVAVSIFII
FSYRIFGVLA VIGLVFNIVF IITILTLLQA TLTLPGLAGI TLTVGMSVDA NVLIFERIKE
ELKSTKKLKW AVESGFKNAM STIFDSNVTT LIVAAIMFVI GSGPISGFAI TLSIGILCSM
FSAITLTKML IDLYIRLFNL KTLSI
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