Gene ECH_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_1083 
Symbol 
ID3927854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp1109879 
End bp1111702 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content27% 
IMG OID637902197 
Productpentapeptide repeat-containing protein 
Protein accessionYP_507868 
Protein GI88658408 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.581758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATT GTATAAAACA CACTTTTACA GTTTTAATAA TATATACATT ACTTTTGAAC 
ACTAATATAT GTTTTGCCCA TACGACAGAT CAAGATAATT TTTTTACTGT AAAACGCACT
TCTTATACTA AAGAAGATTT TGTAAGCTTC ATAGTAAAAT GTCATGCTAA AGGAATACCT
TTAGATTTCA AGAAGGAATT CGGCAATAAT TTATCTGGAG CAGATTTTAG TGATCTAGAC
CTTCGAGGAT CAGTATTTGA TAACGTTAAC CTACTACATG CAAATTTTAC TAGAGCTAAC
TTATCCAATT CCACTTTTAT AGATTCCAAT ATGCAAGGAG CATCCTTCAT TAATGCAAAC
TTAAGTAAAT CCAACATAAA AAATTCAAAC TTAAATTTTG CCAATTTCAC ATCTGCAGAT
TTACAAAAAA CTACAATTAC ACAATCAAAA ATCAACAATA CAAACTTTAG TTACTCAGAC
ATGCGCTTTT CTATTCTAAC AGAAGTCAAT GGATCCCTTG CAAACTTTTC TGAAACAGAA
TTAAAACTAG TTTCAATATT CAACTCTAAT ATAGAAAAAG CAAATTTTCA TGACATTGAA
GGTGAAAATA TAGTAATCCA AAATTGTAAT TTACTAGATT CAAACTTTTT TGGAGCAAAT
TTAAATAATT CAAAAATTCA ATTTTCAAAT CTCACAAATA CTATCCTATA CGCAGTAAAT
CTAGATTCAT CAGATATAAC AGGAAGTAAC CTAAGTAATA GCAACATGGA AGTATCAAAT
ATTTCTTTTG CTAATTTTCA CAATGCTAAT TTAAGCAATA CAAACATGCA TCTTGTAGAT
GCTCATTATA CAAATCTTAA TAATACAAAT TTACATAAAG TTCGTATGAG TGATGCAACT
CTAATTGGAG TAAATTTAAA TCATGCTGTG TTATCTAACG CAGATTTGAG CAACGCAGAT
TTAAGCAATG TCAGCATAGA AGAATCAGAT ATGCAAGAAA TACTTCTTGA CTCTACTAAT
ATTACAAGAA CGAATATGAA GCATGCTATT TTAAATAACG CAACTATTAA TAATACAGTT
ATTTCAAATT CTGACCTTAC GATGACATTA ATAAAAGATT CTAAATGGAA TAACTCTAGT
ATCTATTCAA GCAAATTAAC CTCTGCAGTT ATAGATAACA ACATTATTAA ACATGGTACA
TATGATAAAG TAAATGCAAC AAATACATTA TGGTCTAATT CAACAATAGA AGATAGCAAC
ATAATTTTCT GCAATTTTGA ATCTGCAATA TTCAATAATG ATAAAATACA TAAAGTGAGC
TTTTTTACAA ATCACTTAGA ATCCGCAAAA GTAGAAGATT CAAACATAGT CGGATCTAGC
ATTTACAAAA ATACTCTCAC CAATTTCATA ATTAATAATT GTGACATTAA AAATACAATC
ATTATCAACA ATAAGAATTT TGTACCAACA GAATTTTCTA AACAGGCAAT TACATCTATT
ACAGCTTTAC AAGACGCTAT CACAAACAAT AAAGTATTTG ATGTCAATTT TTCTAATTTT
GATTTTAGAA AAATAAACTT AAACAATGCA AATTTTTCAA ACTCTATATT AAAGAATGCA
AACTTTTCAG GATCACAATT AGAAAACGTA AATTTTACTA ACACAAATCT ACAATCTTCT
CAATTTGAAA ACTCACAACT TAAAAATGTA GATTTTTCTA ATGCAAATTT AGAAAACGCG
AACTTATCGA ACAGTAAATT AAATGATATC AACACATACA AAACAAATTT GCGTCACGTA
AAAACTGACA ATACTCAGAA ATAA
 
Protein sequence
MKHCIKHTFT VLIIYTLLLN TNICFAHTTD QDNFFTVKRT SYTKEDFVSF IVKCHAKGIP 
LDFKKEFGNN LSGADFSDLD LRGSVFDNVN LLHANFTRAN LSNSTFIDSN MQGASFINAN
LSKSNIKNSN LNFANFTSAD LQKTTITQSK INNTNFSYSD MRFSILTEVN GSLANFSETE
LKLVSIFNSN IEKANFHDIE GENIVIQNCN LLDSNFFGAN LNNSKIQFSN LTNTILYAVN
LDSSDITGSN LSNSNMEVSN ISFANFHNAN LSNTNMHLVD AHYTNLNNTN LHKVRMSDAT
LIGVNLNHAV LSNADLSNAD LSNVSIEESD MQEILLDSTN ITRTNMKHAI LNNATINNTV
ISNSDLTMTL IKDSKWNNSS IYSSKLTSAV IDNNIIKHGT YDKVNATNTL WSNSTIEDSN
IIFCNFESAI FNNDKIHKVS FFTNHLESAK VEDSNIVGSS IYKNTLTNFI INNCDIKNTI
IINNKNFVPT EFSKQAITSI TALQDAITNN KVFDVNFSNF DFRKINLNNA NFSNSILKNA
NFSGSQLENV NFTNTNLQSS QFENSQLKNV DFSNANLENA NLSNSKLNDI NTYKTNLRHV
KTDNTQK