Gene ECH_1072 details

Gene Information

• Locus tag: ECH_1072
• ID: 3927751
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia chaffeensis str. Arkansas
• Kingdom: Bacteria
• Replicon accession: NC_007799
• Strand: +
• Start bp: 1102226
• End bp: 1102774
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637902186
• Product: OmpH family outer membrane protein
• Protein accession: YP_507857
• Protein GI: 88657746
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2825] Outer membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATTAA GGTTATTTTT AGCTATTTTT ATATTACTAT TCGGTTTAAG TTGCCAAGCT 
TCGGCAAAAA ATGATCAGAA CATCCCTGTA GCCTTCATTG ATCGTGATCT AATTATATCT 
GAAGCACTCG CAGTAAAAAG CATTAGAACA CAATTAGACA ACAAAAGAGA AGAACTACAG 
AAAGATTTTT CAGCAAGAGA AGAAGAGTTG CATAAAATCG AAGAAGATTT AAGTAAGCAA 
AAAGCTATCT TAAGTTCTGA AGCTTTTGAA AAGAAAGTTG CAGATTTTAA AATAAAGGTA 
TCAAATCTAC AACAAGATAT TTCTGTAAAA GGATCAGAAT TAGAAAATAT GTATATGAAC 
GCTATGGAGA TGGTTTACAA TAAGATTAAA AACATCTCAG CTAAAATAGC AAAGGAAAGA 
AGCATTAGCT TAGTTTTATT CTTAATGAAG AAAAATCAAG TATTTTACGC TGCTGATAAT 
ATAGATTTTT CTAACGAAGT ATTAGAAATG TTAAACAAAG AATTACCAAA TATAGAAATA 
AAGAAGTGA 

 

Protein sequence

MQLRLFLAIF ILLFGLSCQA SAKNDQNIPV AFIDRDLIIS EALAVKSIRT QLDNKREELQ 
KDFSAREEEL HKIEEDLSKQ KAILSSEAFE KKVADFKIKV SNLQQDISVK GSELENMYMN 
AMEMVYNKIK NISAKIAKER SISLVLFLMK KNQVFYAADN IDFSNEVLEM LNKELPNIEI 
KK