Gene ECH_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_1071 
Symbol 
ID3927344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp1099889 
End bp1102210 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content30% 
IMG OID637902185 
ProductOMP85 family outer membrane protein 
Protein accessionYP_507856 
Protein GI88658234 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID[TIGR03303] outer membrane protein assembly complex, YaeT protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0702133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATACA TTATTATTAT TTTAATATTA TTTACTTCTT CTCTTGCACA TGCAGAGGCT 
TTAAATACTA AAATTAAGCA AGTTCAAATC AATGGCAACC ATAGGTTAGA TTACAAAACT
ATATATTTTT ACTCAAAAAT TAACTTACAA GATAATGTAA CACAAGAGAC TATAGATCAA
ATCATTAAAA ACTTACATTC AACACAACTA TTTTCACATA TAGAAGTATA TGTTAATCAG
GATAATTACT TAGTAATCAA TGTAACAGAA AATCCTGTCA TCAATAATAT AGTTTTCTAT
GGAAACAAAG AATTCAGTAA AAAAGATCTC GTAAATGATA TCTTAAAATT AAAAAAGTTA
GCAGTTTTTA CAAAATCAAA ATTACAGCAA GATATATCAA ATCTTTTATC ACTATACCAA
AGCAAAGGTA AGTTAAGCGC AAAAGTTACC TATGAAGTAA AAGAACTTGA GAATAATAAA
ATAGATATCA TTATAAAAAT AAATGAAGGA CCAACATCAA GAATAAAAAT TATTAAATTT
ACTGGAAATC AGTTCTTTTC AGATGCAATG TTAAAAAAAG CTATACAATC AAGTGAATAC
TATCCTTATA AAATATTCAG TAGTAATACA AAATTTGCTT CTGAAAGATT AATGCTTGAT
CAAGCAGGAT TATATAACTT TTACACATCT AAAGGTTTTA TAGACTTTAA GATTAAATCT
GTAGTACCAG AAATTAGAGA AGATCATAAT ATTAATCTTA TTTTCGCTGT TGAAGAAGGG
ATAAGGTATA AGTTTGGTAA TAGTAACATC ATCATAGATA AACAAGTTAG TAATCACCAA
CAACTAAAAG AAGAAATTCA GAATCTTATA TTATCAAAAA GTGGTGATAC ATTTAACCGA
GAATCCATTA ATAATTCTAT CGAAAAAATT ACCCAATATT TAAGTAACAA TGGAAACTTC
TTTTCAGATA TAAAGCATGA ATACCGTGTC AAGGATGATG TGGTCGATAT AGATTACATA
ATATATACAG GCAATAAAGT TTACATTAAT AATATAAGTA TCACTAACAA CAAGACTACT
TTAGATCAAG TAATCAGACG AAAGTTGACT ATTTCTGAAG GCGACATATA TAATGCCAGC
GTCATTAATA GATCTTATAA AAACATATTA GGATTAGGTT TTTTTGAGTC TGTAAATGTA
GAGAATCATA AAATAAATGA CAGCTTAGTT GATTTAAATT TTCAAGTTAA AGAAAGAGGT
ACTGGTACAT TTTCTGTATC AGCAGGATTT TCTAGTGTCA CCGGACTTGT AGGTAAAATA
AACATACAAG AGAGAAACTT ATTTGGAACT GGAAAAATAT TGTCTTTACA AGCAGAAAAA
TCTACTTCTT CCTTATCTAG CAGCATTGAT TTTGTAGTGC CAAATTTCTC AGAGACTGAT
TCAGCAGTAG GGTTTGGTTT ATTCTATTCA CATCAGAACA AACCAAAAGG CAAAGATTTT
CCAAATCTCA TTAACCCAGC CGCTATTACA GGTAATACAG ATGCTGCATT CAGCAGCAGC
AACGCTGGTT TCATGTTACA TACATCACAT GATATAACTG ATGACCTCAA TCTTGCATTG
CACTATGCTT ACAAACATGT AAACATATTT AATGTTAAAG ATACTGCATC TGAATTAATT
AAGGAACAAG CTGGTAAGAA TATTGATTCA TCCGTTGGTT ATTCTCTTCA ATTCCGCAAG
TTTGATAATT TATCTAAAAT TAAGGATGGA TATCTTGTTA AGCTACATCA AAGCTTTTCC
GGATTAGGTG GAACACTACA TTACATTAAA ACCGAAGGTT CTGTAAATTA TAGCAGAGAG
ATTCTTCCTA AAGTTAGTAG CGATATCCTT TTAAACATTA AAACTTCTAT GGGATATGTA
TTCTCATATA AAAGTGATGA GCAAGTAAAA ATCAATCAAC GTTTCATAAT AGGAAGCAAT
GAAATCAGAG GATTCCATGT ATCAGGTATA GGACCAAGAG ATAAAAAGAC ATTAGATGCA
TTAGGTGGAA AGTTTTACTT TAATATGATT AATCAAGTTG ATTTTCCTAT CGGTTTACCA
GACGATTTGG GAATAAAAGG CTCTCTCTTT GTCGATGCAG CAACTTTATT TGGCCTTGAC
TATATAAATA AAGAATATTA TGAAGACAAA TCACTAAGAG TTTCTGTAGG CTTTGGTATT
TCATGGCGTT CTCCATTTGG ACCAATGAGA TTAGATTTTG GCTTCCCTAT ACTAAAAAAA
GACTATGATG TTACAGACAT GATAAGATTT TCAATGCAAT AG
 
Protein sequence
MRYIIIILIL FTSSLAHAEA LNTKIKQVQI NGNHRLDYKT IYFYSKINLQ DNVTQETIDQ 
IIKNLHSTQL FSHIEVYVNQ DNYLVINVTE NPVINNIVFY GNKEFSKKDL VNDILKLKKL
AVFTKSKLQQ DISNLLSLYQ SKGKLSAKVT YEVKELENNK IDIIIKINEG PTSRIKIIKF
TGNQFFSDAM LKKAIQSSEY YPYKIFSSNT KFASERLMLD QAGLYNFYTS KGFIDFKIKS
VVPEIREDHN INLIFAVEEG IRYKFGNSNI IIDKQVSNHQ QLKEEIQNLI LSKSGDTFNR
ESINNSIEKI TQYLSNNGNF FSDIKHEYRV KDDVVDIDYI IYTGNKVYIN NISITNNKTT
LDQVIRRKLT ISEGDIYNAS VINRSYKNIL GLGFFESVNV ENHKINDSLV DLNFQVKERG
TGTFSVSAGF SSVTGLVGKI NIQERNLFGT GKILSLQAEK STSSLSSSID FVVPNFSETD
SAVGFGLFYS HQNKPKGKDF PNLINPAAIT GNTDAAFSSS NAGFMLHTSH DITDDLNLAL
HYAYKHVNIF NVKDTASELI KEQAGKNIDS SVGYSLQFRK FDNLSKIKDG YLVKLHQSFS
GLGGTLHYIK TEGSVNYSRE ILPKVSSDIL LNIKTSMGYV FSYKSDEQVK INQRFIIGSN
EIRGFHVSGI GPRDKKTLDA LGGKFYFNMI NQVDFPIGLP DDLGIKGSLF VDAATLFGLD
YINKEYYEDK SLRVSVGFGI SWRSPFGPMR LDFGFPILKK DYDVTDMIRF SMQ