| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_1051 |
|---|
| Symbol | hflC |
|---|
| ID | 3927188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 1079622 |
|---|
| End bp | 1080491 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637902165 |
|---|
| Product | hflC protein |
|---|
| Protein accession | YP_507836 |
|---|
| Protein GI | 88658164 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01932] HflC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAT CATTTAAGTT CATATTAGGG TTTTTAACTA TCGCAACAGT TATCGTATCA
TTAAACTCCA TGTTTATTGT CGATGAAGCA CATCAATCAA TAGTCCTACA ATTTGGACGC
GTAGTAAAAC AGATACACAA TAGCGGATTA TATTTTAAAG TACCTTTTAT ACAGAAGGTT
GTGTATGTTG ACAAAAGAAT TATCGATATT AGTTCTGACT CAAGAGAAGT TATCGCTGCT
GATCAAAAGA GATTTATCGT TGATTCTTAT GCAAAATACA AGATTGTAGA TGCCGTCAAA
TTTTATCAAA CAGTCAGAAA TGAAACAGGA TTAAAGAATA GATTAAGTTC TATCATCGAA
TCAAACATCC GTGAAAAAAT AGGAAATGTA TCACTTATTA ATTTTCTAAA TGAAGCAAGA
TCAGAAGTTA TGTCAGTGAT ACAAGAAGGC GTTAGCAAAG AGTCCCAAAA ATTTGGCATA
GAAATGATAG ACGTCAGAAT TAAGCGTGCA GATCTACCAG AAGAAAATAG CATAGCTATA
TTTAGACGTA TGCAAACAGA TAGAGAAAAA GAAGCAAAAG AAATCAGAGC AGAAGGAGAA
GCAGCGTCAC AGCGCATTAA AGCTGATGCA GACCTTCAAA CTCGTATTAT CATCGCAAAT
GCGATCAAAG AAGCACAAAT CATTCGAGGG AATGGAGATG CTAAAGCTTC AAAAATTTAC
AATGAAGCTT TAAAATCTGA TCCAAATTTC TTTAGTTTTT ATAGAACAAT GCAAGCATAT
AAGCATGCTT TCAATGGGAA AAATACAAGA ATTATCTTAT CACCTAATAA TGATTTTATT
AATTTGTTTA ATAAAGAAAG AGGTAAATAA
|
|---|
| Protein sequence | MSKSFKFILG FLTIATVIVS LNSMFIVDEA HQSIVLQFGR VVKQIHNSGL YFKVPFIQKV
VYVDKRIIDI SSDSREVIAA DQKRFIVDSY AKYKIVDAVK FYQTVRNETG LKNRLSSIIE
SNIREKIGNV SLINFLNEAR SEVMSVIQEG VSKESQKFGI EMIDVRIKRA DLPEENSIAI
FRRMQTDREK EAKEIRAEGE AASQRIKADA DLQTRIIIAN AIKEAQIIRG NGDAKASKIY
NEALKSDPNF FSFYRTMQAY KHAFNGKNTR IILSPNNDFI NLFNKERGK
|
|---|
| |