Gene ECH_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_1005 
Symbol 
ID3927020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp1031483 
End bp1032235 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content32% 
IMG OID637902121 
Productputative competence protein ComL 
Protein accessionYP_507792 
Protein GI88657674 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.372557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCACT CTAAAATTAT TCGCAAGGCT GTTTACTTGT TATGTTGTTG TTTTTTAATG 
GTAAACTGCT CTTTCATAAA GAAGGGAGAA AAATTTGTTG AAGATCGAAC AGCAGATGAA
ATGTATGAGA GTGCCTTAAA GAAATCTAAT GCCAAAGAAT ATAAGAGTGC GGTAAAAGAT
CTTGAGGAAA TAGACAATCT TTACCCATTT TCTCCTGTGG CGATAAAAGC TCGTCTTATG
ATGTCATTTT TGAATTATGA ACTTGGCGAT TATTCTCGTG CTGAAATTTA TGCGGATGAT
TATATACAAC TTTATCCTGA TAGTAAGGAT ATAGATTTTG CATATTATTT AAGGATAATG
GCGAACTACA TGCAAATTAG TGATATAGAT CGTGATCAAA GTAGTGTGCA TAAAGTTTTG
GAATTGTTGA ATGAGTTTAT ACGTCTCTTT CCCAACTCTA TGTATTTAGA AGAAGTTATG
AAAAGATTAG AACTTGTTCA TCAACATATT GCTGGTAAGG AATTTTCAAT AGGTAAGTTT
TATTTGCAAC GTGGTGAATA TGTTGCTGCT ATAAAAAGGT TTAGTACAAT ATTAAATAAG
TATAAGGATA CGAAATATTA TTCAGAAAGC TTATATAGAA TTGCTGAAGC GTACTTAGCT
TTGGGGGATA TTGCTGCCTA TGCAAGATAT ATGTCATTAC TTAAAGAATG TTGTATTGAT
ACTGGATGGT ATAAAGAACC TTTGGTTAAA TAA
 
Protein sequence
MCHSKIIRKA VYLLCCCFLM VNCSFIKKGE KFVEDRTADE MYESALKKSN AKEYKSAVKD 
LEEIDNLYPF SPVAIKARLM MSFLNYELGD YSRAEIYADD YIQLYPDSKD IDFAYYLRIM
ANYMQISDID RDQSSVHKVL ELLNEFIRLF PNSMYLEEVM KRLELVHQHI AGKEFSIGKF
YLQRGEYVAA IKRFSTILNK YKDTKYYSES LYRIAEAYLA LGDIAAYARY MSLLKECCID
TGWYKEPLVK