Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_1005 |
Symbol | |
ID | 3927020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | - |
Start bp | 1031483 |
End bp | 1032235 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637902121 |
Product | putative competence protein ComL |
Protein accession | YP_507792 |
Protein GI | 88657674 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.372557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTCACT CTAAAATTAT TCGCAAGGCT GTTTACTTGT TATGTTGTTG TTTTTTAATG GTAAACTGCT CTTTCATAAA GAAGGGAGAA AAATTTGTTG AAGATCGAAC AGCAGATGAA ATGTATGAGA GTGCCTTAAA GAAATCTAAT GCCAAAGAAT ATAAGAGTGC GGTAAAAGAT CTTGAGGAAA TAGACAATCT TTACCCATTT TCTCCTGTGG CGATAAAAGC TCGTCTTATG ATGTCATTTT TGAATTATGA ACTTGGCGAT TATTCTCGTG CTGAAATTTA TGCGGATGAT TATATACAAC TTTATCCTGA TAGTAAGGAT ATAGATTTTG CATATTATTT AAGGATAATG GCGAACTACA TGCAAATTAG TGATATAGAT CGTGATCAAA GTAGTGTGCA TAAAGTTTTG GAATTGTTGA ATGAGTTTAT ACGTCTCTTT CCCAACTCTA TGTATTTAGA AGAAGTTATG AAAAGATTAG AACTTGTTCA TCAACATATT GCTGGTAAGG AATTTTCAAT AGGTAAGTTT TATTTGCAAC GTGGTGAATA TGTTGCTGCT ATAAAAAGGT TTAGTACAAT ATTAAATAAG TATAAGGATA CGAAATATTA TTCAGAAAGC TTATATAGAA TTGCTGAAGC GTACTTAGCT TTGGGGGATA TTGCTGCCTA TGCAAGATAT ATGTCATTAC TTAAAGAATG TTGTATTGAT ACTGGATGGT ATAAAGAACC TTTGGTTAAA TAA
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Protein sequence | MCHSKIIRKA VYLLCCCFLM VNCSFIKKGE KFVEDRTADE MYESALKKSN AKEYKSAVKD LEEIDNLYPF SPVAIKARLM MSFLNYELGD YSRAEIYADD YIQLYPDSKD IDFAYYLRIM ANYMQISDID RDQSSVHKVL ELLNEFIRLF PNSMYLEEVM KRLELVHQHI AGKEFSIGKF YLQRGEYVAA IKRFSTILNK YKDTKYYSES LYRIAEAYLA LGDIAAYARY MSLLKECCID TGWYKEPLVK
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