Gene ECH_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_1004 
SymbolcyoE 
ID3927251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp1030528 
End bp1031415 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content33% 
IMG OID637902120 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_507791 
Protein GI88658064 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.458622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCTA AATGTGAAAG TGTTAAACCA CAGCTTGTAA ATGAAGTATT AGGCTATTGG 
GATCTACTCA AACCAAAAAT CATGTATTTA GTAGTTCTTA CAGGAATTAC AGGAATGATT
ATTGCTCCAG GAAATATTCA TCCTTTTATC GGTATCATCA GTACCTTATG CATAGCACTA
GGATCTGGTG CTGCAGGAGC AATTAATATG TGGTATGACA GTGATATAGA CGCATTAATG
CAACGTACCA AAAATCGTCC TATACCTTCT GGAAAAATTG CTAGATCTAC TGCAATTGAA
TTGGGATTAG TGTTATCCGT TATTTCTGTA ACAGTAATGA TGATCGCCGT TAACTATCTA
TCAGGAATAT TACTAGCTAT CAGTATAGGA TTCTACTCAC TTGTATACAC AATGTATCTT
AAAAGAAGAA CACCACAAAA TATAGTCATA GGAGGAATTG CAGGAGCACT GCCTCCAATT
ATTGGATGGA CTTCTGTAAC TAACGCCATC TCCATAGAAA GCTTGATATT ATTTCTAATT
ATATTTGTAT GGACTCCTCC ACACTTTTGG GCATTATCTT TATTAAACTA TCAGGAATAC
GAAAAGGCTA AAGTACCAAT GTTACCTGTC ACACATGGAA TATTCACTAC CAAAATTTAT
ATACTAGTAT ATAGTATCAT ACTATTTATT ATAACACTAT TACCTGGAAT ATTTTTAAAA
GATTGTTTGT TATATGAAAC TTGTGCAATA CCACTTGGCA TGACATTCGT GTTCCATGCT
TTCAAGGTAT TTGTATCAAT CAACCACTAT AAATACAAAG CAATGTTTAC TTATTCTATT
GCTTACCTCT TTATTTTATT CATATGTATT ATTATCTCAA GTTTTTAA
 
Protein sequence
MSSKCESVKP QLVNEVLGYW DLLKPKIMYL VVLTGITGMI IAPGNIHPFI GIISTLCIAL 
GSGAAGAINM WYDSDIDALM QRTKNRPIPS GKIARSTAIE LGLVLSVISV TVMMIAVNYL
SGILLAISIG FYSLVYTMYL KRRTPQNIVI GGIAGALPPI IGWTSVTNAI SIESLILFLI
IFVWTPPHFW ALSLLNYQEY EKAKVPMLPV THGIFTTKIY ILVYSIILFI ITLLPGIFLK
DCLLYETCAI PLGMTFVFHA FKVFVSINHY KYKAMFTYSI AYLFILFICI IISSF