| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0952 |
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| Symbol | rpoB |
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| ID | 3927386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 976116 |
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| End bp | 980258 |
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| Gene Length | 4143 bp |
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| Protein Length | 1380 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637902068 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_507740 |
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| Protein GI | 88658392 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTT CTGTAACTTC TACTAAATAT GTATTAAATT CTTTTAATTC AGTGCCTAGA
TTATCTTATG CAAAGTCAAT AGATATAAAA GATTCGTTAA CTGATTTAAT AAAAATACAG
AGGGATTCAT ACAATGCATT TATTGGGATA GATCAAAATA CTGAAAGTGG AATAAAGAAT
ATTTTCCAAT CTATGTTTCC TATACAAGAC TTATTAGGTC GGGCTGTTCT TGAGTTTGTA
AGTTATAGTA TTGGTGAGCC ACAGTATGAT GAGTATGAAT GTATAAAAAG GGGTATTACT
TTTTCTGTAC CTATACGTAT AGTTCTGCGT TTTATAGTAT GGAAGGTTCA GGAAGTATCT
TTCAAGGAAG TAAAATATGT AGTAGATGAA GAAACATCAG AAAAGAGTAT AAAATATATA
AAAGAGCAAG AGGTTTCCAT AGGAGATCTT CCTACCATGA CTTCTCATGG GACGTTTATC
ATAAATGGAA TAGAAAGAGT GATAGTATCA CAAATGCATC GTTCTCCTGG TGTATTTTTT
GATAGTGATA AAGGAAAAAC TTATAGTTCT GGGAAATTAA TTTATTCGGC CAGAATTATT
CCTTATAGAG GTTCATGGTT AGACTTTGAA TTTGACATAA AAGATATACT TTATTTTCGC
ATTGATAGGA AGAGGAAGCT ACCAGTCTCT TTACTTTTAA GAGCTTTAGG TTTATCTAAT
AATGATATTT TGGATACTTT CTATGATAAA ATACGTTATG TAAAATCTGA AAAAGGATGG
GTTGTTCCAT TTGTTGCTGA TAGATTTAGG GGTGTTAGAT TATCTCATGA TCTTATGGAT
TCAGATGGTA ATGTATTGGT GAAAGCTAAT ACCAGAATTA CTTTAAGAAT GGCTAGAAAA
TTAGCTAATG ATGGGCTTAC GAAGTATTTA GTTCCATTTA ATGAAATTCA AGGATTATTT
ATTGCTAATG ATTTATTAGA TTCAACTGGA AATGCTTTAA TTATATCTGC AGGAGAAAAT
ATTACTAGCG AGCATATAAA CAAACTAGAA TTGTTTAATA TAGAGGAAAT CTTTGTTTTA
AATATAGATT TTCTAACAGT TGGTCCATAT ATTTTAAATA CCTTATTTTT AGATAAAAAT
GTATCTTATG AAGATGCGCT GTTTGAAATA TATAAAGTTT TACGTTCTGG TGAATCACCT
AGTTTAGATA CTATAAAAGC CTTTTTTGAT GGGTTATTTT TTGAAAAAGA AAGATATGAC
CTATCTACTG TTGGAAGAAT AAAGTTAAAT GATCATCTTG GGTTAAATGT TAGTGAAGAT
ATTACGGTAC TAACTAAAGA TGATATAATT CATGTCATAA AGAAATTAGT GTTATTGCGG
GATGGTGAAG GTTCTGTTGA TGATATCGAT CATCTTGGTA ATCGTAGAGT AAGATCTGTT
GGTGAGTTTA TTGAGAATCA GTTTAGGATT GGTATATTGC GACTTGAAAG AATGATCATG
GATTATATGT CTTCGGTCAA TTTTGATAAT GCAATGCCAT GTGATTTTGT AAATCCTAAG
GTTTTGGCTA CTGTTTTGAA AGATTTCTTT AGCTCTTCTC AGCTTTCCCA ATTTATGGAT
CAGACTAATC CATTATCTGA AGTTACTCAT AAACGTAGAT TATCTGCTTT AGGTCCAGGT
GGTTTAACTA GGGAAAGAGC AGGTTTTGAG GTTAGAGACG TACATCCAAC ACATTATGGA
AGGATTTGTC CAATTGAAAC TCCAGAAGGC CAAAATATTG GATTGATCAG TAGCTTGGCT
ATTTATGCCC GTATTAATAA GCATGGGTTT ATTGAGAGTC CTTATAGAAA AGTGGATAAA
GGAGTTGTTA CTGATAAAGT AGAATACCTG TTAGCTATGC AGGAAAGTAA TTATTATATA
GCTGATGCTA GTGCTACTCT TGATGAGAAT AATCAGTTTG TTGATGATAT GCTTTATTGT
AGGCATGATG GAAATTTTGT AATGGTTAAG AGGGAAGAAG TTGATTATAT AGATGTTTCT
CCAAAGCAAA TAGTTTCAGT TGCTGCGTCT TTAATACCTT TCTTAGAGAA TAATGATGCA
AACCGTGCCT TAATGGGTTC TAATATGCAA CGTCAAGCAG TACCTTTATT AAAAGCAGAT
GCTCCTTTGA TTGGTACTGG TATGGAATCA ATAGTTGCTG CAGGATCAGG AACAGTTGTT
TTAGCTAAAC GTGGAGGTAT TGTTCATAGG GTAGATGGAC TGTATATAGT TATTCGTGCG
TTTGATCAGG AAAAAAATGA ATATTTAGGT GTTGATATTT ATAACTTAAG GAAATTCCAA
CGTTCTAATC ATAATACTTG TATTAATCAG CGACCTTTAG TTAAACCTGG AGATTATGTA
AAAGCAAATG ATGTTATAGC TGATGGATCA GCAATTGATC AAGGTGAGCT TGCTTTGGGT
AAGAATGTGT TGGTTGCGTT TATGTCTTGG CAGGGATATA ACTTTGAAGA TTCAATAGTT
ATTTCAAGTG AAGTTGTAAA GAAAGATGTA TTTACTTCAA TACATATAGA AGAATTTGAA
TGTGTAGTTA GAGATACAAC GCTTGGTCCG GAAAAGATTA TGAGGTCTGT TCCTGATATC
AATGAGGATA GTTTATCTCA TTTGGATGAT GTTGGAATTG TTAATGTTGG AGCTGAAGTT
TCTGCAGGAG ATATTTTGGT TGGTAAAGTG ACACCTAGAC CACCAGTTTC TTTACCTCCA
GAAACAAAAT TGTTAGTTAC TATTTTTGGT GAAAAAGTAT TTGATTGTGT AGATTCTTCA
CTATATTTGC CACTTGATGT TGAAGGGACA GTAGTTGATG TGCATGTTTT TGTGCGTCGT
GGTGTTGAAG AAAATGATAG ATCTCTTTTA ATTAAACAAA ATGAAATCAA TGGTTTTATA
AAAGAAAGGG ATTATGAAAT AGATGTAGTT AGTGAGTATT TCTATGATGA ATTGAAAAGA
GTTTTGGTGA GTTCTGGTGT ACAGTATAAT AATCAGAATA TAGATGATTA TTTAGCATCT
ATTCCAAAGA AGGAATGGTG GGATATTAAC TTATCTGATG AAGCTATGTT GCTTCAAGTT
AAGGACTTGA AAGAAAAATT TGATTCAATG ATTCAAAATG CTCATAGTAA GTTTGATCAA
AAGATAGATA AATTAAACTA TGGATATGAT TTACCTCAAG GTGTTTTGTG TATAGTTAAA
GTTTTTGTTG CAGTAAAACA TAATTTACAG CCAGGAGATA AAATGGCTGG TAGACATGGT
AATAAGGGGG TGATTTCTCG TATTGTACCT GTTGAAGATA TGCCATACTT AGAGGATGGC
ACTCCTGTTG ATATTATACT GAACTCTTTG GGTGTACCTT CTCGTATGAA TGTTGGGCAG
ATTTTAGAGA CGCATTTAGG ATGGGCATCT GTTAATTTAG GGAAAAAGAT AGGGCATATA
TTAGATAACC TTGATGAATT GACGGTATCT CATTTAAGAA ACTTTTTATA TCAAGTATAT
GATGGGCAAG ATTTAAAAGA TAATATTCAG TCTATGAGTG ATGAGGATCT TTTGGTTTTT
GCAGAAAGAT TGCGTGATGG CGTGCCTATG GCTGCACCAG TATTTGAAGG GCCAAAAGAT
AGTCAAATTT CTAACTTATT AAGATTAGCT GATTTAGATG TTTCAGGGCA AGTAGATCTT
TATGATGGAA GAATTGGTGA AAAATTTGAT CGTAAGGTTA CTGTAGGATA CATATACATG
TTAAAGTTAC ATCACTTAGT GGATGATAAA ATACATGCAA GATCTGTTGG TCCATATGGG
TTGGTAACTC AGCAACCATT AGGTGGAAAA TCTCATTTTG GTGGTCAACG TTTTGGAGAA
ATGGAATGTT GGGCATTGCA AGCTTATGGA GCTGCTTATA CCTTACAAGA AATGCTTACA
GTAAAATCTG ATGATATTGT TGGAAGAGTT AAGATTTATG AATCTATCAT TAAGGGTGAT
AGTAATTTTG AATGTGGAAT ACCAGAATCC TTTAATGTAA TGGTAAAAGA GTTAAGATCA
TTGTGTTTAG ATGTTGCTTT AAAGCAAGAT AAGGATTTCT TAAGTAATGA AGTGAAAGAT
TAA
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| Protein sequence | MSSSVTSTKY VLNSFNSVPR LSYAKSIDIK DSLTDLIKIQ RDSYNAFIGI DQNTESGIKN
IFQSMFPIQD LLGRAVLEFV SYSIGEPQYD EYECIKRGIT FSVPIRIVLR FIVWKVQEVS
FKEVKYVVDE ETSEKSIKYI KEQEVSIGDL PTMTSHGTFI INGIERVIVS QMHRSPGVFF
DSDKGKTYSS GKLIYSARII PYRGSWLDFE FDIKDILYFR IDRKRKLPVS LLLRALGLSN
NDILDTFYDK IRYVKSEKGW VVPFVADRFR GVRLSHDLMD SDGNVLVKAN TRITLRMARK
LANDGLTKYL VPFNEIQGLF IANDLLDSTG NALIISAGEN ITSEHINKLE LFNIEEIFVL
NIDFLTVGPY ILNTLFLDKN VSYEDALFEI YKVLRSGESP SLDTIKAFFD GLFFEKERYD
LSTVGRIKLN DHLGLNVSED ITVLTKDDII HVIKKLVLLR DGEGSVDDID HLGNRRVRSV
GEFIENQFRI GILRLERMIM DYMSSVNFDN AMPCDFVNPK VLATVLKDFF SSSQLSQFMD
QTNPLSEVTH KRRLSALGPG GLTRERAGFE VRDVHPTHYG RICPIETPEG QNIGLISSLA
IYARINKHGF IESPYRKVDK GVVTDKVEYL LAMQESNYYI ADASATLDEN NQFVDDMLYC
RHDGNFVMVK REEVDYIDVS PKQIVSVAAS LIPFLENNDA NRALMGSNMQ RQAVPLLKAD
APLIGTGMES IVAAGSGTVV LAKRGGIVHR VDGLYIVIRA FDQEKNEYLG VDIYNLRKFQ
RSNHNTCINQ RPLVKPGDYV KANDVIADGS AIDQGELALG KNVLVAFMSW QGYNFEDSIV
ISSEVVKKDV FTSIHIEEFE CVVRDTTLGP EKIMRSVPDI NEDSLSHLDD VGIVNVGAEV
SAGDILVGKV TPRPPVSLPP ETKLLVTIFG EKVFDCVDSS LYLPLDVEGT VVDVHVFVRR
GVEENDRSLL IKQNEINGFI KERDYEIDVV SEYFYDELKR VLVSSGVQYN NQNIDDYLAS
IPKKEWWDIN LSDEAMLLQV KDLKEKFDSM IQNAHSKFDQ KIDKLNYGYD LPQGVLCIVK
VFVAVKHNLQ PGDKMAGRHG NKGVISRIVP VEDMPYLEDG TPVDIILNSL GVPSRMNVGQ
ILETHLGWAS VNLGKKIGHI LDNLDELTVS HLRNFLYQVY DGQDLKDNIQ SMSDEDLLVF
AERLRDGVPM AAPVFEGPKD SQISNLLRLA DLDVSGQVDL YDGRIGEKFD RKVTVGYIYM
LKLHHLVDDK IHARSVGPYG LVTQQPLGGK SHFGGQRFGE MECWALQAYG AAYTLQEMLT
VKSDDIVGRV KIYESIIKGD SNFECGIPES FNVMVKELRS LCLDVALKQD KDFLSNEVKD
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