Gene ECH_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0830 
Symbol 
ID3927773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp844398 
End bp845549 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content30% 
IMG OID637901947 
ProductHK97 family phage major capsid protein 
Protein accessionYP_507626 
Protein GI88657903 
COG category[R] General function prediction only 
COG ID[COG4653] Predicted phage phi-C31 gp36 major capsid-like protein 
TIGRFAM ID[TIGR01554] phage major capsid protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAT CAATGCTAGA AATTCAAGAA TCACTACATA ATCTTACATC TTCATGGGAA 
GAGTTTAAAA ATCTAAATGA AAAAAAATTA TCAGATATAA GTAAAAAAAG TTCTACATAC
CCATCCATAT TAGAAAAATT AGAAAAAACA GAAAGCATGC TAGAAATACA AAATGAAAGA
TTGGATCAAT TAGAAATATC ATCACAGCGC CCTGTTACCC ATGATAACAA ACACTATAAT
GAAGATTATA ATTATAAAAC GTTCACACAA TACCTATGTA AAGGCACTAA TCTTCAAGGT
CAAAGTAGTG TTGTGCAGCC CTTAGATGAA TCGTACTTTA TACCACATAA CATATCATCT
TATATAGAAA CAAATCTAAC TAAGAACTCA GTAATGCGTC AATTATGTTC TATAGAAAAA
ATATCTGGAG ATAGTTTAGA CTGCTTTATC AGAAACAACA ATGAAAAGTC TGTTAACTGG
AGAACAAGCA ATAACGTAGA AGATACAGAA TCACCAAAAA TTGATAAAAT TACTATCAAT
TTACATGAAT TATATACTCA ACCAAAAATA ACAAAGAAAT TACTAGAAGA TTCTACTATA
GATGTAGCCA GCTGGTTAAT TAATCACTTA GTTGATGATT TCAGCAGAGC AGAAAATACC
GCTTTTATAT CTGGTGATGG AAACAACAAG CCATATGGTA TCTTAACATA TGCTTCAGAC
ATAGAAAATA ACACCATAAC ATCTACAACA CTAAATAGTG ATATAATTAT CAAACTTTAT
TATTCACTTG ATGAATATTT CTCCAGAAAG GCAGCATTCA TAATGCACAG AAGTGTACTA
CAAGAAATTA GATCTTTAAA GTTAGCATCT GGCCAATATA TATGGCATCC AGGACTAACA
TCAGGAAGTC CTGACACATT AATGGGGTTA CCAGTATATC AAACATCCGA TATGCCTCAA
TTAGACAATA AAACATTACC AACCATAGCA CTTGCAGACT TTAAAAATGC ATATAAGATA
GTAGAAAACC GTTCAATTAA AACATTAAGA GATCCTTTTA CAAGCAAACC CTTTGTCAAG
TTTTATACAA CAAAACGAGT AGGAGGAGCA GTCATTAATA AAAATGCTAT AAAATTTTTA
ACAATAAAAT AA
 
Protein sequence
MTTSMLEIQE SLHNLTSSWE EFKNLNEKKL SDISKKSSTY PSILEKLEKT ESMLEIQNER 
LDQLEISSQR PVTHDNKHYN EDYNYKTFTQ YLCKGTNLQG QSSVVQPLDE SYFIPHNISS
YIETNLTKNS VMRQLCSIEK ISGDSLDCFI RNNNEKSVNW RTSNNVEDTE SPKIDKITIN
LHELYTQPKI TKKLLEDSTI DVASWLINHL VDDFSRAENT AFISGDGNNK PYGILTYASD
IENNTITSTT LNSDIIIKLY YSLDEYFSRK AAFIMHRSVL QEIRSLKLAS GQYIWHPGLT
SGSPDTLMGL PVYQTSDMPQ LDNKTLPTIA LADFKNAYKI VENRSIKTLR DPFTSKPFVK
FYTTKRVGGA VINKNAIKFL TIK