| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0828 |
|---|
| Symbol | dapA |
|---|
| ID | 3927943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 843296 |
|---|
| End bp | 844189 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637901945 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_507624 |
|---|
| Protein GI | 88658264 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAGCC TTATGGGTGT TTTTACGGCA TTAATTACAC CATTTAAGGA TGATTTTTCT
ATAGATGAAA ACGCGTTTTG TCATCTAATT GAAGAACAAA TCAGTAATAA TATTCATGGT
TTAGTTCCAT GCGGCACTAC TGCAGAATGT CCTACTTTAA GCTTTGAAGA GTACTGCAAA
GTAATCGAAT TATGTGTTAA AATCACAAAT AAACGTGTCC CCATAATAGC TGGATCAAGC
TCAAATTCTA CACAAGAAGC TATTAAACGC ACGTTATATG TTCAGTCTCT AAATGTAGAT
GCAGCTTTAG TAGTTGTACC ATATTACAAT AGACCAAGTG ATGAAGGAAT ATATCAACAT
TTTAAAGCAG TACATGATGC AACTAACCTT CCCATTATTG CATATAATAT ACCTAATAGA
TCTGCTATTG ATGCAAGCGA TGCATTACTT GCACGAATTT TATCTTTGCC TAGAATAATA
GGGCTTAAAG ATTCAACTGG AGATGTAAGT AGGCCTCTTA ATTTAAAATT ATTACTAAAT
AAAGAAGTAG TTTTATTCTC AGGTGATGAT TCTACATGCT TAGGGTTCTA TGCTCAAAGT
GGTAGTGGTG GTAGGACTGG ATGCATTTCT GTTGTTTCAA ATGTGATACC TAAAATACAT
GCTGATATGC ACAATGCATT CCTTGCTAAT AATATGAAAG AAGCTATGAA TGCAAATTTA
TCAGTATTTA AATTAGCAAA AGCATTGTTT TGTCAGTCAA GCCCTGCACC AACAAAATAT
GCTATGAGCT TAATTAAAAA TATCTCACCA GCAGTAAGGT TGCCATTAGT GGAATTAACT
CAAGAAAACA AATTAAAAGT TGAAAAAACG CTAAAAGAAT TAAAGTTAAT TTAA
|
|---|
| Protein sequence | MYSLMGVFTA LITPFKDDFS IDENAFCHLI EEQISNNIHG LVPCGTTAEC PTLSFEEYCK
VIELCVKITN KRVPIIAGSS SNSTQEAIKR TLYVQSLNVD AALVVVPYYN RPSDEGIYQH
FKAVHDATNL PIIAYNIPNR SAIDASDALL ARILSLPRII GLKDSTGDVS RPLNLKLLLN
KEVVLFSGDD STCLGFYAQS GSGGRTGCIS VVSNVIPKIH ADMHNAFLAN NMKEAMNANL
SVFKLAKALF CQSSPAPTKY AMSLIKNISP AVRLPLVELT QENKLKVEKT LKELKLI
|
|---|
| |