| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0779 |
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| Symbol | psd |
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| ID | 3927224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | + |
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| Start bp | 793322 |
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| End bp | 794002 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637901897 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_507577 |
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| Protein GI | 88657717 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTTATA ATTTTATTCA TAATATCCAT AAAGAGGGAT ATATATTTAT AATGATATCA
TTTCTTGCGT CTTGCATTGG ATTTGCTATT TCTTGTAGCT TAGGAATAAT TTGTTTAGTC
ATATCATTGC TATGTATATA TTTTTTCCGT GATCCTATAC GTATGGTGCC AGAAGGAGAT
GATCTCATTA CTAGTCCAGC TGATGGGTTA ATATTAGATA TTAAAGAAGT GAACTCTCCT
ATAGATGATT CTACACAAGT AGTATGCATT AGTATTTTTC TAAATGTGTT GAACGTTCAT
GTCAATAGAA TTCCTGTTTC TGGAACTATT AAGGCTACAG AGTACATACC AGGGAGGTTC
ATATCAGCTT CACTAAATAA ATCAAGCGAA TTAAACGAGA GACAAAGATT AATTATTGAA
TCCAAAATTG ACAACCGTTC AATTATTGTA GATCAAATCG CAGGATTAAT AGCACGACGC
ATAGTATGCA ACGTTTCTGA AGGTCAACAA GTTAATTCTG GAGAAAGATT TGGTATTATT
AGGTTTGGTA GTCGAGTTAA TTTATATCTA CCATTAAATA CTCACATATC AGTGTTTAAG
GGACAAACAG TAATAGGTGG AGAAACTATT TTAGCATATT TACAAGACGC TCCTAAACAA
TTAACAGTTA AGTCTATATA A
|
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| Protein sequence | MLYNFIHNIH KEGYIFIMIS FLASCIGFAI SCSLGIICLV ISLLCIYFFR DPIRMVPEGD
DLITSPADGL ILDIKEVNSP IDDSTQVVCI SIFLNVLNVH VNRIPVSGTI KATEYIPGRF
ISASLNKSSE LNERQRLIIE SKIDNRSIIV DQIAGLIARR IVCNVSEGQQ VNSGERFGII
RFGSRVNLYL PLNTHISVFK GQTVIGGETI LAYLQDAPKQ LTVKSI
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