| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0622 |
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| Symbol | truA |
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| ID | 3927636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | + |
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| Start bp | 629795 |
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| End bp | 630532 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 637901744 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_507432 |
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| Protein GI | 88658037 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.939748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGATATA AAATTACTAT AGAATATAAT GGATCTAATT TTATTGGATG GCAAAAACAA
AAACACTCAT CAAATTCCAT TCAAGAAATT CTTGAAAATG CAATACTCAA ATTTTCACAA
CAACATACTA CAGTATATGT TGCGGGAAGG ACTGATGCTG GTGTACATGC TTTAGGTCAA
GTAGCACATT TTGATTTAAC AACAAACCTT GACACATATG TAGTAAGAAA TGCAATAAAT
TATCACTTAA TACCTCATGC AATTGCCATA TTAAGTGTAG AAAAAACAGA TGATAAATTT
CATGCAAGAT TTTCAGCAAA AAAACGTCAC TATTTATACA AAATAATAAA TCGTTATTCA
CCATTAACAA TAGATTATAA TCGTGCGTGG CTTATACATA ATCCTTTAAA TATTGAAAAT
ATGATACAAG CTATCGAATA TATAAAAGGT AATCATGATT TCTCTAGTTT CAGAGCAAGG
CATTGTCAAT CCAAAAATCC AATAAAAACA ATAGATGATT TAAAAATTAT TCATAATAAT
CAATCTATTA ACATTCATAT TTCTGCTATA TCATTTTTAC ATCATCAAGT ACGTATTATT
GTAGGTACAC TAGTTGAGTG TGGAAAAAAT AATTTTTCAC CAGAACATAT AAAAAATATC
TTAAAAGCAA AAAATAGATC TTATGCAGGT ATGACAGCAC CACCATACGG CTTATATTTT
GTAAAAGTAG ATTATTAA
|
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| Protein sequence | MRYKITIEYN GSNFIGWQKQ KHSSNSIQEI LENAILKFSQ QHTTVYVAGR TDAGVHALGQ
VAHFDLTTNL DTYVVRNAIN YHLIPHAIAI LSVEKTDDKF HARFSAKKRH YLYKIINRYS
PLTIDYNRAW LIHNPLNIEN MIQAIEYIKG NHDFSSFRAR HCQSKNPIKT IDDLKIIHNN
QSINIHISAI SFLHHQVRII VGTLVECGKN NFSPEHIKNI LKAKNRSYAG MTAPPYGLYF
VKVDY
|
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