Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0533 |
Symbol | rrmJ |
ID | 3927590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | - |
Start bp | 534405 |
End bp | 535043 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637901655 |
Product | ribosomal RNA large subunit methyltransferase J |
Protein accession | YP_507347 |
Protein GI | 88658179 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.527691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTTCTTCCA CACGGTGGCT GCACAGGCAA TTAAATGACC CCTATGTTTC ATTAGCAAAA AAACAAGGTT ATAGATCTAG GGCTACGTTC AAGTTGATAG AAATGGATAG CAAGTTTTCT ATCTTTAAAA AAGGACAGTA TGTATTAGAT CTTGGATCAT CCCCTGGAGG GTGGTCTCAG TTTGCAGCAC AAAGGGTATC ACACAACAAT AATAACCCAG TATTTGCTGT TGATATACAA AATATGGATG CAATTCCCAA TGTAATATTT ATTCAATGTG ACATTATTAA TGATATAGAA CTCTTAAGTG ATAAATTTCA TAATAAAAAA TTTGATGTAA TATTATCTGA TATGGCACCA AAGGCTTGTG GGAATAAACA AGTTGATCAT GCAAATATAA TTAATTTATG CGAAATATCT CTTGATATTG TAGTAAGATT TACACGTGAA AACGGAGTTT TCATCACTAA AATTTTACAA GGAGAATATG AAAAAGAATT CTATCAATCA ATGAAAACTT ATTTTCAATC AGTAAAGTAT TTTAAACCAA AAGCAAGTAG AAAAGACTCA TCAGAAATGT ATTTAGTAGG ACTAGGATTT AAAAAAGATT CACAAGATAT TAAAACAATT GAATCATAA
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Protein sequence | MSSTRWLHRQ LNDPYVSLAK KQGYRSRATF KLIEMDSKFS IFKKGQYVLD LGSSPGGWSQ FAAQRVSHNN NNPVFAVDIQ NMDAIPNVIF IQCDIINDIE LLSDKFHNKK FDVILSDMAP KACGNKQVDH ANIINLCEIS LDIVVRFTRE NGVFITKILQ GEYEKEFYQS MKTYFQSVKY FKPKASRKDS SEMYLVGLGF KKDSQDIKTI ES
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