| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0497 |
|---|
| Symbol | |
|---|
| ID | 3926991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 486464 |
|---|
| End bp | 489232 |
|---|
| Gene Length | 2769 bp |
|---|
| Protein Length | 922 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637901620 |
|---|
| Product | VirB6 family type IV secretion system protein |
|---|
| Protein accession | YP_507312 |
|---|
| Protein GI | 88658206 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.915079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA TAGTTTTGAT AATCAGTATT TTTCTTCTTT CAAGTTGTGG CTATCATGGT
TGTATTAAAC CGCAGAGTGT ACTATTTGAT GAATATTCAA CTACTGTAGA AGCTGGATTA
GAAGATGGGA AAAAAGAACA TGTTGCTTGG GTTAAATCGG ATTTGGTACT AGCTGGAAGA
CAGTTCCTTA CTATAAAAGT TGATACAGTG AATGTTAATT TTTGTAATAA TACAAAAGAT
GTGGTAAATA TTTTTTCTAG TGAAGGGAGT ACTCTTGATT CCAGTGCTAA AAAATTTCCT
GTTAACATCC CTAATATAAT GAAGGGGGAA AAGTTAAATT TTAGGTTATC TCCAGCTTTG
AAATTTACTG TGGATAAAGA TATATGTAAA AATAACAACC CTAAAGTTTA TGTTCAGAAT
ACTAGTAAAT GCATGGAGGA TTATCTTGAT ACGGAATATT ATATTCCGGT TGATAATTAC
GATTTTCAAA TGAATAATCT CATGTATTTG AAAGATCGTG GTTCAGCAAA TAAAGATAAG
GAGAAGTCCT GGATTAATTT TCCACTTAAA ATTTTATATC ATCTAGATAG AAAAACATAT
AGAGATGTGA GTCAGATGAA TATTTCTAAG TTATCTAGTG ATCGTTATCA AAATAATAAT
GATCTTTTCT ATCTTTGTGT TACGGATAAG AGGCTGAATG AATATGTAAC TAAAATTGTA
GAAGATATGT TAAACAAAAC ATCTAGTGGC AATACTGCTT ATTCAGGAGA TAAAAAGGAG
CAACTAATAT CAGAGAAAAA AGAATCTCTC TTAAGGAAGC GGGATGCAGT TAGAAAGAAA
TATCAAAAAT TATATGATGC GTATACTGTA AATATGCTAT GCGGAAATTT ATGTAATATT
CCTGGTTATG ATAAACAAAA ATTGGATAAA AATTGTTTTG TTGTAGAAAC GAATAATATG
CTTAATAGTT GTACTATTGA GAAAAGTGGT ATATCAGGGT GTAATTTAAA TGAAGCAGGA
CAATATAGTA CTGTTTTGCC TTTTTTATAT TTAACACATG ATTCAGGTAT AACGAATTTT
ATTACTGTTG ATGATGCAGT TAAAAAATGG CAGGCAGATA ACAATTCTTC TTCTGATATT
GGTCTTTTGA CTAATCACCA GTATTCTATT AGTAAAGATT TAGATAAAAA TCTTTATTTA
GAATTGCGTG TCAAAGATGA TTTAGAGTTA ATAGGTAAGT ATACAATTGA AGTAACCAAG
GATTGTAGTA ATCACGTCAA GGATAGTTTA TATTATACCA TATCTAAAGG TCCACCTACA
GTAAAACCAG GAGAACAAGG GACTACACCA CTTAATTTTA TAAATAATGA AGATACAATA
GTCAAATTAA CGGGTAATGA TGAAGTTGGT GAACTATATT TTGGTGTAAA AGATAATGGA
GATGGTTATG AAAATAATAC AGGATATTTT AATATTACAG TAATTGCGAA AAAGAAAATA
CCAAAAGTGA TTTCATATAT GGTAGAACGA TTGAAAGATT CACTGGAAAG AGGATTATAC
GGAACATCAT CTACTAATTC TGGTGGTGTT AATATAATAT ATAATAGTAT TATAGAAAAT
ATGCATTTTA TTAAAATAGT GAATTCATTA TTGGTATTAT ATATATTAAT GAATGCACTG
TTTTATTGTG CTGGGTTTTC TAAGGCTTCT ATTTTTGAAT TGTTAACTAT AACATTAAAA
ATTAGCATAA TAATTTATGT GATTGGTCCT AATAGTTGGG ATTTTTTTAA TAATCATTTG
TTTAAATTAT TCACTGAAGC ACCAATACAA TTAATTTCTA TAATGACAGG TCAAGATCCT
GATACTAGTA CAAGTTTTGA ATTTTTAGAT ATAATCTTAT ATCGGTTTTC TTTATCTGAG
AGTTGGTTAC AGATTTTAGC ATTATTGTTT GCTGGTCCAG TAGGATGGGT AAGTGTAGTT
CTAATTTTTT GGGGATTAGT AGTTTTATTT CTCACTATAG CAACTGCAGT TATTACTTAT
TTGATATCTA TTATTCTTAT AGGATTGTTG CTTAGTATTG CACCTTTCTT TATAATTTGT
ATTTTATTTA GACGTACTAA AGCAATTTTT GATTCGTGGA TTAAGTCTTT GGTACAGACA
GCTATGCAAC CAGTGATAAT ATTTGCTTCT TTTGCTCTTT TGACTCAAGT TATAGATAAT
ATAATATATG CTATGTTTAA TTTTGAATCA TGTGATGTAT GTGTACTTCG TCCTGAGTTT
GACATAGGAA TTACGACAAT AGGTTTTTGT TTACTTGAAT TTTTGCTCCC TTTAGGATTC
TCTCCTGTAT CAGTTTTTAC TGATAATGTA AGAGATTCAG TGAATAGTGA TACAGTTATG
TTTATAGGAT TACCAATGCC TATTGTTAAT ATATTAATAT TTGTAATAAT GGCAAATGCG
ACAAAGCATT TTGTTGGTTC TTCTGGGGAA ATGTGTACAT CAATTTTTGG TTCATTTGCT
AATTTATCTA TGGTGGCTGA GGGTGCTAAA GAAAGTGCAT TAGGCATTAT TGGTATGGAT
CAAAATAGCC GTATGCAAAG GTCAAGGTAT CAGCAAATGA ATGAGATGAA TAATCAAGAT
AGCGATGGTG AACGTCGACG TGATCCTCTT GACTTGCATT CGCCTTCAAG AAGTGATGAC
TCTACCAACA GGACATCACG TGGTGGTGTA TCAATACCTG AAAATCCTCC ATCTAGTTTC
GGTAGGTAG
|
|---|
| Protein sequence | MFKIVLIISI FLLSSCGYHG CIKPQSVLFD EYSTTVEAGL EDGKKEHVAW VKSDLVLAGR
QFLTIKVDTV NVNFCNNTKD VVNIFSSEGS TLDSSAKKFP VNIPNIMKGE KLNFRLSPAL
KFTVDKDICK NNNPKVYVQN TSKCMEDYLD TEYYIPVDNY DFQMNNLMYL KDRGSANKDK
EKSWINFPLK ILYHLDRKTY RDVSQMNISK LSSDRYQNNN DLFYLCVTDK RLNEYVTKIV
EDMLNKTSSG NTAYSGDKKE QLISEKKESL LRKRDAVRKK YQKLYDAYTV NMLCGNLCNI
PGYDKQKLDK NCFVVETNNM LNSCTIEKSG ISGCNLNEAG QYSTVLPFLY LTHDSGITNF
ITVDDAVKKW QADNNSSSDI GLLTNHQYSI SKDLDKNLYL ELRVKDDLEL IGKYTIEVTK
DCSNHVKDSL YYTISKGPPT VKPGEQGTTP LNFINNEDTI VKLTGNDEVG ELYFGVKDNG
DGYENNTGYF NITVIAKKKI PKVISYMVER LKDSLERGLY GTSSTNSGGV NIIYNSIIEN
MHFIKIVNSL LVLYILMNAL FYCAGFSKAS IFELLTITLK ISIIIYVIGP NSWDFFNNHL
FKLFTEAPIQ LISIMTGQDP DTSTSFEFLD IILYRFSLSE SWLQILALLF AGPVGWVSVV
LIFWGLVVLF LTIATAVITY LISIILIGLL LSIAPFFIIC ILFRRTKAIF DSWIKSLVQT
AMQPVIIFAS FALLTQVIDN IIYAMFNFES CDVCVLRPEF DIGITTIGFC LLEFLLPLGF
SPVSVFTDNV RDSVNSDTVM FIGLPMPIVN ILIFVIMANA TKHFVGSSGE MCTSIFGSFA
NLSMVAEGAK ESALGIIGMD QNSRMQRSRY QQMNEMNNQD SDGERRRDPL DLHSPSRSDD
STNRTSRGGV SIPENPPSSF GR
|
|---|
| |