Gene ECH_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0470 
Symbol 
ID3927099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp446614 
End bp448434 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content31% 
IMG OID637901593 
Productribonuclease 
Protein accessionYP_507286 
Protein GI88658461 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAAATC ATAATAAAAG GATATTAATT GATGCAGTAT ATCAAGATGG AATTAGAGTA 
GCAGTATTAC GTGATGGACA GGTTGTAGAG TTTGATCAAG AATCAAAGAA TAAAAAGTGT
TTAAAAGGAA ATGTATATTG TGCTGTAGTG AAACGTATAG AACCATCTTT ACAAGCAGTA
TTTATTGAAT ATGGAGCAAA TAAACACGGG TTTTTGCCTT TTTCTGAAAT ATCATTAGAT
TATTATAATA TTTCTGAAGA AGAGAAAGAA AAATTATATC AAGTATTATA TGAAGATTCT
GATGTAAAAA ATGATGATGA TGTAAAATCT GTAGATGACT CTGTTGCATG TGATACTAAG
GATCAAGATA ATGTTAGTGA TTGTAATGAC AAGTTGACAT TATTGAAGAA AGATAATTTG
CGAAATGGTA AGTCTAAATT ACCTTTTTAC AAATTGTATA AAGTGCAAGA TGTAATAAAG
CTTGATCAAA AATTAATGGC GCAAATTGTA AAAGAGGAGC GTGGAAATAA AGGAGCAACT
TTTTCAACAT TTATTACCCT GGTTGGTAGA TATTGTATAT TTATGCCAAA TTCTGGTAAT
AAGAATAGTG GAATATCGCG TCGTATTGAA GATGCTGATG ATAGAAAAAT TTTAAAGAAT
TTTCTAAGTG CTATAAAACT GCCGAAAGAA TCAGGAATAA TTATTAGAAC TGCTGGGTCT
AATAAGAACC AGAAAGAAAT AGAGCAGGAT TTATCTTATT TACAGTCGAC TTGGCGAAGT
ATACAGAATA GTTATATAAG TGTTACTATG CCTTTATTGT TATATGTTGA AGGTGATATA
ATAAAAAGAA CATTACGGGA TTATTGTGAT GAGAATACGC AAGATATTAT TGTATCAGGT
AGCTACGCAT ATGAGTTAGC AAAAGAATGT GTTAAGTTCA TGTTTAGGAA CAGGGTGCGT
CTTAGAATTT ATAAGGGCAG TGTTCCTATT TTCTCTTATT ACAAAATTGA GTCGCAAATT
TGTGAACTAT ATGGAAATGT AGTTAATTTG CCTTCTGGAG GATATATGGT TATTACTCCA
ACAGAAGCGT TGGTATCAAT AGATATTAAT TCTGGTAAGA TGACAGGAGA GGATAGTATT
GAGGAGACAG CTTATAAAAC AAATATGGAA GCTGTAAAGG AAATAGCTAG ACAAGTAAAC
CTGCGAGGGT TATCTGGATT AATAGTGATA GATTTTATTG ATATGTTAAA ATATCGCTAT
TGTAGGTCAG TTGAATCTGA AATTAAAGAA GCTTTTAAAT ATGATAAAGC AAAAGTACAG
TTTGGCTATA TAAGTACATT TGGTTTGATG GAAATATCAA GACAGAGGGT CAAGCAAAGT
ATATTAGAAG CGAATACGGT ACAATGTTCA CATTGTAAAG GAGTAGGTAG GGTTAGGTCT
TTGGAATCTT CTTCTGGAGA TATATTACGT GATATTAGAT ATTGTGCTAA TAAGAATCGT
AATAAATTGA TCAACATTTC TGTTGCTGGA CAAATGGTAG AGTATTTTTT TAATAATAAA
CGTCAACATA TTGCTGAGAT TGAAGAAGAA TTCAGTGTGT CAGTTAAGTT AACTGTGAAT
CAAAATACGA GTAGTGTATC TGATTTTAAT ATTAGTGTTG AAAATGATGA TATGTTAAAT
CAAGGTAAGG ATGCTGTTAA TGTATTTACT GTTGATTATA AAATTTCTGA AGATAATAAA
TTAAAAGAGG AAATACAAAA AACTCCTACT GGAAACATGT GGATAAAGAA GTGGTTGACC
CGCATATTTT CACATATTTA A
 
Protein sequence
MSNHNKRILI DAVYQDGIRV AVLRDGQVVE FDQESKNKKC LKGNVYCAVV KRIEPSLQAV 
FIEYGANKHG FLPFSEISLD YYNISEEEKE KLYQVLYEDS DVKNDDDVKS VDDSVACDTK
DQDNVSDCND KLTLLKKDNL RNGKSKLPFY KLYKVQDVIK LDQKLMAQIV KEERGNKGAT
FSTFITLVGR YCIFMPNSGN KNSGISRRIE DADDRKILKN FLSAIKLPKE SGIIIRTAGS
NKNQKEIEQD LSYLQSTWRS IQNSYISVTM PLLLYVEGDI IKRTLRDYCD ENTQDIIVSG
SYAYELAKEC VKFMFRNRVR LRIYKGSVPI FSYYKIESQI CELYGNVVNL PSGGYMVITP
TEALVSIDIN SGKMTGEDSI EETAYKTNME AVKEIARQVN LRGLSGLIVI DFIDMLKYRY
CRSVESEIKE AFKYDKAKVQ FGYISTFGLM EISRQRVKQS ILEANTVQCS HCKGVGRVRS
LESSSGDILR DIRYCANKNR NKLINISVAG QMVEYFFNNK RQHIAEIEEE FSVSVKLTVN
QNTSSVSDFN ISVENDDMLN QGKDAVNVFT VDYKISEDNK LKEEIQKTPT GNMWIKKWLT
RIFSHI