Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0459 |
Symbol | nrdA |
ID | 3927177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 434039 |
End bp | 435826 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637901583 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_507276 |
Protein GI | 88658153 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.158112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGACAG TAATTGTTGA TTATGAAAGA GATAATAATC TTACAGCTTT TGGCAAAGCT GTATTGTCTG ATAGGTATTT ACTTGAAAAT GAAGATTATC AACAACTGTT TGTAAGAATT TCTGAATATT ATTCAGACAA TCCAGAACAT GCACAAAGGT TGTATGATTA TATGAGTCAA CTATGGTTTA TGCCTGCTAC TCCTATACTA AGTAATGGTG GTACAAATAG AGGGTTGCCA GTTTCATGTT TTCTCAATGA AACAGAAGAT AGTTTAAGAG GTATTGTTAA TTTATGGAAT GAAAATGTAT GGTTGGCATC TAAGGGTGGT GGAATAGGAA GTTATTGGGG AAATTTGCGT TCTATAGGTG AAAAAGTACG TGGTAGTGGT AAAACTTCTG GTATTATACC GTTTATTGTA GTCCAAAATG CTTTAACTTT GGCAATTAGT CAAGGATCAT TACGTCGGGG TAGTTCTGCT GTATATTTGC CTGTTTGGCA TCCAGAGATT GAAGAATTCT TAGATTTAAG AAAACCAACA GGTGGTGACC CTAATAGAAA AGCATTAAAT ATACATCATG GGGTTGTATT ATCAAATAAA TTCATGAAAT GTGTAGAAAA TGATGAACCA TGGGATTTGA TCAGCCCTAA AGATCAGTCG GTACTTTTTA CTATAAAAGC ACGTGATATA TGGATAAAAA TTTTGACAAC AAGAGTTGAA ACAGGTGAGC CATATATATT ATTTATTGAC CAAGTTGATA ACAATAAACC TGAAATTTAT AAAAGACTGA ATTTAGACAT AAAAATGTCT AATTTATGTA CAGAAATAAC TCTCACTACT GGATATGATC ATTTAAATAA GTCACGTACT GCTATATGTT GTCTTGCATC ATTGAATCTT GAATATTATG AACAATGGAA GGACAATTCG TTGTTTATTG AAGATGTTAT GAGGTTTCTT GATAATGTGC TAACTGATTT TATAGAAAAA GCTCCTAGTG AAATGGAAAG AGCAAAATAT TCTGCGATGC GTGAACGTAG TATAGGAGTT GGAGTGATGG GGTTCCATTC ATTTTTGCAA AGTAAAATGA TACCCTTTGA ATCTGTAGCA GCTACAATAT GGAATAAAAA GATATTTTCT CATATAAGAA AACATGCAGA TGCTGCGTCT TATAATATTG CTATGGAAAA AGGTTCTTGT CTTGATGCAC AAGATGCTGG TATTGTAGAG AGGTTTGTAA ATAAGTTATC TATTGCTCCT ACTGCATCAA TTTCTATTAT TGCTGGAAAT ACTTCTCCTG GTATTGAACC ATATGCAGCA AATGTTTTTA CACATAAAAC TTTAACTGGT TCTTTTATTG TAAGAAATAA GTTTTTGCAA AAATTGTTAA AGCTAAAAGG TAAAGATAAT GAACAGGTAT GGTCTTCTAT ATCAACTAAT GAGGGATCTG TACAGCATTT GGATTTTTTA ACTGAAGAAG AAAAATTAAT ATTTAAAACT GCATATGAAC TTGATCAAAG GTGGATAATT GAGCATACAA GCGATAGATC AAAATATATA TGCCAGGCAC AATCTGTAAA TATTTTTCTT CCTGCTAATG TTCACAAAAG GTATTTGCAT AAAATACATT TTCTTGCTTG GAGGAAAGGA TTGAAAAGTT TGTATTACTG TAGATCAAAA TCAATCCAAC GTGCAGATAA AGTATCTCAT GGGGCATTAG AAAAATCAAT TGAACAATAT AAGCAAATTA CAAACTTTGA TTATAATGAG TGTTTATCTT GTCAGTAG
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Protein sequence | MGTVIVDYER DNNLTAFGKA VLSDRYLLEN EDYQQLFVRI SEYYSDNPEH AQRLYDYMSQ LWFMPATPIL SNGGTNRGLP VSCFLNETED SLRGIVNLWN ENVWLASKGG GIGSYWGNLR SIGEKVRGSG KTSGIIPFIV VQNALTLAIS QGSLRRGSSA VYLPVWHPEI EEFLDLRKPT GGDPNRKALN IHHGVVLSNK FMKCVENDEP WDLISPKDQS VLFTIKARDI WIKILTTRVE TGEPYILFID QVDNNKPEIY KRLNLDIKMS NLCTEITLTT GYDHLNKSRT AICCLASLNL EYYEQWKDNS LFIEDVMRFL DNVLTDFIEK APSEMERAKY SAMRERSIGV GVMGFHSFLQ SKMIPFESVA ATIWNKKIFS HIRKHADAAS YNIAMEKGSC LDAQDAGIVE RFVNKLSIAP TASISIIAGN TSPGIEPYAA NVFTHKTLTG SFIVRNKFLQ KLLKLKGKDN EQVWSSISTN EGSVQHLDFL TEEEKLIFKT AYELDQRWII EHTSDRSKYI CQAQSVNIFL PANVHKRYLH KIHFLAWRKG LKSLYYCRSK SIQRADKVSH GALEKSIEQY KQITNFDYNE CLSCQ
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