Gene ECH_0427 details

Gene Information

• Locus tag: ECH_0427
• Symbol: rplO
• ID: 3926972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia chaffeensis str. Arkansas
• Kingdom: Bacteria
• Replicon accession: NC_007799
• Strand: +
• Start bp: 406321
• End bp: 406791
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637901551
• Product: 50S ribosomal protein L15
• Protein accession: YP_507245
• Protein GI: 88658246
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.169028
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACAG TTGTAAAATT GAATAATATA TTTAGCGGGT TACCTAAAAA TAAGAAGTCT 
AAAGTATTAG GTAGAGGTAT AGGTTGCGGA AAAGGTAAAA CTTCTGGTCG TGGACACAAG 
GGACAAAAGG CAAGGTCAGG GGTTTCTATA AATGGTTTTG AAGGTGGGCA ACAGTCTATA 
TTTACTAGAT TACCTAAGAG GGGATTTAAT TCCTTGCTTA AGCATAGGTA TTCAATAGTC 
AATTTATCGA CGATTCAAAG GTTGATTGAT AGTAAAAAGA TTGAAGATGT TTCTGCTATT 
ACAAAAGAGG TTCTATATAA TTTAGGAGTT ATTTCTTCTA TTAAAGAAAA AATTAAGATT 
CTTGGAAATG GTAAATTAAA TACTGCGGTA GCAATAGAAT ATGATTTTAT TTCAAAATCA 
GCAGAATCAC AGGTTACTTT GTTAAGTAAT GTATCAGCAA GTAAAGAATA G 

 

Protein sequence

MDTVVKLNNI FSGLPKNKKS KVLGRGIGCG KGKTSGRGHK GQKARSGVSI NGFEGGQQSI 
FTRLPKRGFN SLLKHRYSIV NLSTIQRLID SKKIEDVSAI TKEVLYNLGV ISSIKEKIKI 
LGNGKLNTAV AIEYDFISKS AESQVTLLSN VSASKE