| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0390 |
|---|
| Symbol | |
|---|
| ID | 3927891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 384907 |
|---|
| End bp | 385764 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637901514 |
|---|
| Product | SPFH domain-containing protein |
|---|
| Protein accession | YP_507210 |
|---|
| Protein GI | 88658078 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.911481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAGTA AAGAATTTTG TGATAAGAAA TTAGTGCACA TTAATGGATT TTCAATGATA
TTTTGGTGTA TTGTTTTTAT TTTGTTGTTG TTGTCTGGTA TATACTATGG AAATTTTTTT
ATTGTGTTAC CAATGTCTCT AGTGTCGTTA ATTTGTACAT TTATTATTCC AAGTGGATTT
TTTGTGAATA ATCCTAATGA AGCAAAAGTT GTTGAATTTT TTGGAAATTA TATTGGGACT
ATATTTAAGT CAGGTTTTTT TTGGACTATT CCCTTTGTTC GCATGAGGTC AATTTCATTA
AAGGTGAGAA ATGTTAATAC AAGTAAGATC AAAGTAAATG ATTTTAATGG TAATCCAATA
GAGATAGCTG CAGTAGTTGT GTGGCGAGTT GTGAGTCCTG CAAAAGCTTG TCTTAATGTG
AGTGATTATC AAGAGTTTAT TAATATTCAA AATGAAGCTG CGGTTAGGGA ATTAGCTGGT
AGCTATCCAT ATGATGCTGA AGATAATAGT GAATCTTTAC GTAATAATTC GACAAAGATC
TCGTCTAAGT TACGTGATAT GTTACAGAAT AGATTAGATT TGGTAGGTGT TATTGTAGAG
GATGCACGAA TATCACATTT AGCTTACTCT TCTGAGATAG CTCAAATTAT GTTAAGAAGG
CAGCAAGCAA AAGCTATTAC TAATGCTAGA GGATATATAG TAAGAAATGC AATCATTATG
GTAGACGAGA TATTAAAGCA TTTTGAATTG CAATATCAAA TTAATCTTTC TGATGAGCAA
AAAGTTAAAC TTGTGAATAA CCTTTTAGTA TCTTTAATCT CAGAGCAAGG AACTCAACCT
ACTATTAATA TAGAATAA
|
|---|
| Protein sequence | MNSKEFCDKK LVHINGFSMI FWCIVFILLL LSGIYYGNFF IVLPMSLVSL ICTFIIPSGF
FVNNPNEAKV VEFFGNYIGT IFKSGFFWTI PFVRMRSISL KVRNVNTSKI KVNDFNGNPI
EIAAVVVWRV VSPAKACLNV SDYQEFINIQ NEAAVRELAG SYPYDAEDNS ESLRNNSTKI
SSKLRDMLQN RLDLVGVIVE DARISHLAYS SEIAQIMLRR QQAKAITNAR GYIVRNAIIM
VDEILKHFEL QYQINLSDEQ KVKLVNNLLV SLISEQGTQP TINIE
|
|---|
| |