| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0341 |
|---|
| Symbol | |
|---|
| ID | 3927844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 331351 |
|---|
| End bp | 332286 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637901465 |
|---|
| Product | phage integrase family site specific recombinase |
|---|
| Protein accession | YP_507161 |
|---|
| Protein GI | 88658398 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATC AAAAGCTGTG TATTGTTGTA AATGAATGGG TGTCTTGGAT AAAAAAAGAA
AGAAGATATG CGACTAATAC TGTTGATTCT TATCTAAGAG ATGTTAATAA GTTTATTGAG
TTTTTGTATA TGTGTGTTTT GCGTCCTGTT ACTTTAGAGG ATATTATTGG TGTAAAAGTT
GCAGATTTAA GGAAATGGTT TGCATTTAGA TACCAGGCTA ATATAGAAGC TGTAACAAAT
GCAAGATCTT TGTCAGCATT GAAAAATTTT TTTCGGTATT TGTCACGTAC TTATAATATA
GATGGTCAAG CAGTGTTTTG TTTATCTAGA CCAAAACTTA AAAGTACTTT ACCTAGAACA
TTAACTCAAT CTCACATTCA AAAAATAATA GATTATTATG CGTTATTAGA TACCGATTGG
ATAGTCAAGC GTGATTTTGC ACTAATTGTG CTCCTCTATG GATGTGGTTT GAGAATTAGT
GAGGCAGTGA ATTTAAAGTT TCAGAATATT AGAAGAGAGG AGCTTTTAAT TATTGGGAAA
AGAAGTAAGG AAAGGATCTT ACCTATTTTG CCTATAGTAC GTCAAAGTTT AGATGAGTAT
GTAAGGTGTT GTCCATATCA TATGGAATTG AACTCAGTTA AAAATGAATA TGTTTTTGTA
GGAGTTAGAG GCAAAAAACT TAAAAGGACT TATTTTGCAA ATAGAATACA AAAGATTTGT
AAAGAAATAG GGTTGCCTGA TGTTATAACT CCTCATGCAT TTCGTCATAG TTTTGCAACA
CATTTATTTC TAGGTGGTGC GGATATTAGA TCAATACAAG AATTGTTAGG CCATGCTAAT
TTATCAACTA CGCAAATTTA TACTCATTTA GATCATAAAA GTGTTATAGA TCATTATAAG
AATTTCCATC CTCAAGTTAT AAAAAAGAAT AGTTGA
|
|---|
| Protein sequence | MKDQKLCIVV NEWVSWIKKE RRYATNTVDS YLRDVNKFIE FLYMCVLRPV TLEDIIGVKV
ADLRKWFAFR YQANIEAVTN ARSLSALKNF FRYLSRTYNI DGQAVFCLSR PKLKSTLPRT
LTQSHIQKII DYYALLDTDW IVKRDFALIV LLYGCGLRIS EAVNLKFQNI RREELLIIGK
RSKERILPIL PIVRQSLDEY VRCCPYHMEL NSVKNEYVFV GVRGKKLKRT YFANRIQKIC
KEIGLPDVIT PHAFRHSFAT HLFLGGADIR SIQELLGHAN LSTTQIYTHL DHKSVIDHYK
NFHPQVIKKN S
|
|---|
| |