Gene ECH_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0315 
SymbolsdhA 
ID3928026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp302203 
End bp303999 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content38% 
IMG OID637901439 
Productsuccinate dehydrogenase flavoprotein subunit 
Protein accessionYP_507136 
Protein GI88658480 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.62165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGTT CTGCATATGA TATTATAAAT CATGAATATG ATGTTGTAAT AGTAGGAGCT 
GGAGGAGCAG GTTTAAGAGC AACTTTTGGT ATGACTAATG TTGGTTTATC AGTTGCATGT
ATATCTAAAG TTTTTCCTAC ACGAAGTCAT ACAGTAGCAG CTCAAGGTGG TATTAGTGCT
GCGTTAGGTA ATGTTTCTGA AGATGACTGG AGATGGCATA TGTTTGATAC GGTCAAAGGT
TCAGATTGGC TTGGAGACCA AGATGCTATT GAATATATGT GTAAAAATGC GGCAGAAGCT
GTAATTGAGC TTGAACGTTA TGGAGTTCCT TTTTCTCGTA CTAGTGATGG TAAAATATAT
CAGCGTCCTT TTGGTGGTAT GACTACAGAG TTTGGTAAAG GTAAGCCAGC AGTACGTACG
TGTGCTGCAT CTGATAAAAC AGGTCATGCA ATACTTCACA CATTGTATCA GCAATCTTTA
AAGTATAATG CTAAGTTTTT TGTAGAGTAT TTTGCTATTG ATTTAATAAT GGATGAAGAA
GGCCAGTGTA AGGGTGTATT AGCATGGTCT TTGTGTGATG GTACGTTACA TAGATTTCGT
GCTCATATTG TTGTTCTTGC TACAGGTGGT TATGGAAGGA TATATTTTTC TGCTACTAGT
GCACACACTT GTACTGGTGA TGGGGGAGGT ATGGTATCCC GTATTAATTT GCCGCTGGAA
GATATGGAAT TTGTACAATT TCACCCGACT GGAATATATG GTGCTGGATG TTTGATAACA
GAAGGTTGCA GAGGGGAAGG TGGATATTTA ATTAATTCTG AGGGAGAAAG ATTTATGGAG
CGCTATGCTC CAAAAGCTAA AGATTTGGCA TCTCGTGATG TTGTTAGTAG AGCAATGACT
TTAGAGATTA GAGAAGGTCG TGGTGTTGGT CCAAAAAAAG ATCATGTATA TTTGTCTATA
TCTCATTTAG GTGCAAAAGT TATCAGTGAA AGATTGCCAG GTATTCGTGA GACTGCACGT
ACTTTTGCTG GAGTAGATGT TATAAAGGAG CCAATACCAG TTTTACCAAC TGTTCATTAC
AATATGGGGG GTATCCCTAC AAATTATCAT GGTGAAGTTG TAACTTTAAG CAATAATACA
GAGCAGATAA TACCTGGGCT TTTTGCTATA GGAGAAGCAG CGTGTGTATC TGTACATGGT
GCTAACCGTT TAGGGTCTAA TTCATTGCTT GATTTAGTAG TTTTTGGAAG AGCTGCAGCA
ATTAGAGCAA AAGAGTTAAT CAAACCCGGA ATGTTACATG CTCCAGTGCA GAAGTCATCA
GAAGAGTGGA TAATTGATAG GTTTGATGCG TTAAGGTTTT CAAAAGGAAG TTTACGTGTA
TCAGAAATAC GTAGTAACAT GCAAAATGTA ATGCAAAATC ATGCAGCTGT TTTCCGTACA
GAAGAAGTGC TTGAAGAAGG CAAGCAAAAG ATAAGAAGTG TTGCTGAGTC TCTGTCTGAA
ATTGCGGTTA AAGATAGAAG TATGATATGG AATAGTGATT TGGTTGAAGC ATTAGAGTTA
ACTAATATGA TGCCGCAAGC AGTCGTAACA ATGGAATGTG CTGCAAATCG TCAAGAAAGT
AGAGGGGCTC ATGCACGTGA AGATTTCCCT GATCGTGATG ATGAGAATTG GATGAAACAT
AGCTTAGCAT GGTATAATTC TACAGATTGT TCTGTACATA TAAAGTATAA AGATGTTGCT
AAAGCAACTT TAACAGATGA TGTTCAGTAT TTTCCTCCAC AAAAAAGAGT ATATTAA
 
Protein sequence
MSGSAYDIIN HEYDVVIVGA GGAGLRATFG MTNVGLSVAC ISKVFPTRSH TVAAQGGISA 
ALGNVSEDDW RWHMFDTVKG SDWLGDQDAI EYMCKNAAEA VIELERYGVP FSRTSDGKIY
QRPFGGMTTE FGKGKPAVRT CAASDKTGHA ILHTLYQQSL KYNAKFFVEY FAIDLIMDEE
GQCKGVLAWS LCDGTLHRFR AHIVVLATGG YGRIYFSATS AHTCTGDGGG MVSRINLPLE
DMEFVQFHPT GIYGAGCLIT EGCRGEGGYL INSEGERFME RYAPKAKDLA SRDVVSRAMT
LEIREGRGVG PKKDHVYLSI SHLGAKVISE RLPGIRETAR TFAGVDVIKE PIPVLPTVHY
NMGGIPTNYH GEVVTLSNNT EQIIPGLFAI GEAACVSVHG ANRLGSNSLL DLVVFGRAAA
IRAKELIKPG MLHAPVQKSS EEWIIDRFDA LRFSKGSLRV SEIRSNMQNV MQNHAAVFRT
EEVLEEGKQK IRSVAESLSE IAVKDRSMIW NSDLVEALEL TNMMPQAVVT MECAANRQES
RGAHAREDFP DRDDENWMKH SLAWYNSTDC SVHIKYKDVA KATLTDDVQY FPPQKRVY