Gene ECH_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0300 
Symbol 
ID3928062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp286446 
End bp287609 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content28% 
IMG OID637901424 
Productputative ribonuclease D 
Protein accessionYP_507121 
Protein GI88658362 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATTG ATACTGTCAA AGAATTAGAG CGTTTGTGTA ATCAGCTGCT TGTATTGCAA 
CCTAAATTTA TTGCAGTTGA TACTGAATTT GTAAGAAGTA GTAGTGAATA TTATCCTAAA
TTATGTTTAA TTCAAATTGC ATATGGTAAA GAACAGTTTG TTATTGATGT TTTAGCGAAA
GATATGGATT TATCAGTTTT AGGACATATT TTTTATAATG AAAGTATAAT AAAAGTTTTT
CATGATTGTA GACAAGATAT AGATGCATTG TTAACAAAAT TTCCAGAAAT TCCTAGCCCT
ATATTTGATA CTCAAATTGC TGCCATGTTT TGTTGTTGTT ATGATAATGC AGTTGGATAT
TCTAAGTTAG TAGAGCAATT TTTAGGTATT TCATTAGATA AGCTGAGCTT GAAAAGATCT
AATTGGGCGC TTCGACCATT ATCTGCTGAT AAAATCCAGT ATGCACTTAA CGATGTTATA
TATTTGTATG AGCTTTATCA AATATTATAT AACAATTTAT TAGATGCTGG AAAGTTACCT
TGGTTTTTGG AAGAGATGAA TAATATAGTG TTACAGGAAG TTAACTGTAA TGATGTTTGT
GATATTCCTG ATTTTGGTTC TGATATGACA AAAGAGGAGA TTATTGTTGT AAGATCTGTA
ATTGAATGGC GAGAAAGATT AGCAAAGTTT TTTAATCTTA ATCGCGAATT TATATTAAAA
AACAAGGTAA TGCTATCTTT AGTTAGAGAT TTTATAAAAA AAAGTGATAT TAGTACTTTA
GGTAAGTATA TAAAGAAAGA ATATTTATCA TGTGATGCAG TGTCTGATCT TTTACAAGTT
ATTGATAATA ATCAATCTGT TAATATTGAT GAGTTACATT ATGTAAGTGT TAATAGTTAT
AATAAGTCTG TTTTAAATGT GCTGCTTATA TTGTTATATA ATATGTGTTA CAAAAATAAT
ATCTCACAGA AGTTAGTTGC ATCTAAAGGT GGCCTAATTA GGTTTCTTAA CGGTAAGTTT
AGTTATGTAA TGAAAGGTTG GAGATATGAA TTTTTTGGAT GCGAAGTTGA GAAATTTATG
CAAGGAAAAT CTAAGATTAT AGTCTCAGCA CAAGTACTGG ATAATGATTG TATGGATATT
GTAACTACTT TGACGGAAAT GTAG
 
Protein sequence
MLIDTVKELE RLCNQLLVLQ PKFIAVDTEF VRSSSEYYPK LCLIQIAYGK EQFVIDVLAK 
DMDLSVLGHI FYNESIIKVF HDCRQDIDAL LTKFPEIPSP IFDTQIAAMF CCCYDNAVGY
SKLVEQFLGI SLDKLSLKRS NWALRPLSAD KIQYALNDVI YLYELYQILY NNLLDAGKLP
WFLEEMNNIV LQEVNCNDVC DIPDFGSDMT KEEIIVVRSV IEWRERLAKF FNLNREFILK
NKVMLSLVRD FIKKSDISTL GKYIKKEYLS CDAVSDLLQV IDNNQSVNID ELHYVSVNSY
NKSVLNVLLI LLYNMCYKNN ISQKLVASKG GLIRFLNGKF SYVMKGWRYE FFGCEVEKFM
QGKSKIIVSA QVLDNDCMDI VTTLTEM