| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0299 |
|---|
| Symbol | |
|---|
| ID | 3927821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 284058 |
|---|
| End bp | 286202 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637901423 |
|---|
| Product | putative nitrogen regulation protein NtrY |
|---|
| Protein accession | YP_507120 |
|---|
| Protein GI | 88658105 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.333561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCT GGTTTATAAA GGTATACAGT AATATAAGTA GATTTCAGTT TTTTAAAATC
GTTGCTTCGT TCTTAGCAAT ATCTGTTTTC TTGTTTTTGA TTATAACATA CTGTGTTGTT
TTTCATCATG ATGATCCCCT TGGGCCTGAT CATAGTAGGG CTATAAAGTT AGTATTCTTT
GATTTGATAT TATTTCTACT GTTGATTGCT AGTGTATCTC ATAAGTTGAT TAATATGTGG
ATACGAAGAA AAAGGGGACA TTTAGGTTCT CATTTGCAAA CAAAGATTAT TCTAATGTTT
TCAGTAGTAG CTGTTATTCC AACAATTGTG ATTTCAGGTT TTTCTACTTT GTTTTTTAAT
TATAGTATTC AAGCTTGGTT TAATAAAAGG GTTGAAGCTG TAATGCATGA GTCTATCCAA
GTGGCAGAGG CTTATTTAAG GGAGCATAAG AGAAATATTC GTTCTGATAT TTTAGCTATT
TCACATTATA TATCTGATCA CAAGATAATA TTAAATTATG ATACAGCAGC ATTGCAAAAT
GTTGTGCAAT CTAGGGCAGA TTTATTAGGA TTGGCTGAAA TAATAATTTT TGAACCAAGT
AGGATAGTAG CAAGTAATAA GTTTAGTTTT GTATTAAATT TTGATATGGT CCCATGGAAT
GACTTAGATA GAGTGGATAA TGATAGGATT GTTATTATAA TAAAAGAAAA TATGATACGT
GCTTTTCTTT TACTTGATAG ATTCTCATCT ACTTATATCA TGGTAAGTCG TATTATAGAT
AGAAAAGTTA TTTCTCATTT ATCAGCAACG AAAGGAGCAG TTAAATCATA TAGAGATCTG
CAATCACAGA TATCATCACT ACAAATACAG TTTTCTATGA TATTTATTTT AATATCGTTA
TTGTTATTAT TGACTGCTAT TTGGTACGGA ATTAATTTTT CTGGTGACAT AGTTCGTCCA
CTGTTGGATT TATTCTACGC TACACGTAAA GTTCAAAAGG GTGATTTATC TTTCAAGATA
GAAGAAGGAC GAGTTGGAGA AGAAATGTCT ACGCTTGCAC GTGCATTCAA TCAAATGACG
TCACAGCTTA GTAGCCAACG TTCACAATTG ATAAAACTTT ATCAAGATAT GAATGAACGA
AGAGAATTTA TAGAAGCTGT TTTGTCAGGT GTTTCTTCTG GAATAATAGC AGTAAACTGT
GCTGGTATAA TTACTTTAAT GAATGATAAA GCAAAGGAAT TATTAGCTCC TAATGATATC
CTACATGCAG AACTTGATGA TGTATTTCCT GAAATATCTG AATTGATTAA AAGCTCTAAA
ATGCATGATG AAATTACTGT TTTGAGAAAT AGAAAGTCTT TCACTTTATC TGTGAGAATA
AAATTGCTTG GTAGTGTTAA TAAAGGATAT ATTATTACAT TTGATGATAT TTCAAGTTTA
GTTGATGCAC AGAGATCAGC TGCATGGTCT GATGTTGCAA GAAGAATAGC TCATGAAATA
AAAAATCCTA TTACTCCAAT ATATCTTGCT GCTGAAAGAT TAAGTAGCAA GTATCAGCAT
GAAATTATTT CTGATAAGGA AAGTTTTGGA AGATATATTG ATACAATAAT TCGCCATGTG
ACGAGTATTA GGTGTATTGT TGATGAGTTT GCAAAATTTG CGAAAATGTC GGATCCTGTG
TTAATTAAAC ATGATATTTG TAGTGTAGTA AAAGAGTTGG CGTTTTCCGG GCAGTTTAGT
CGTGGTGTTG TGCATTATGA GTTAGATATA CCAAGTTATC CAATTTTTGT TGTATTAGAT
AAAAATCAGA TAAATCATGT ATTTATTAAC TTGTTCAAGA ATGCATGTGA ATCAATTGAT
ATGAAGTCTA ATAGTATACA GGGACTGATA AAAATTAGTG TAGTTGATGA TAGAGATTGT
GTTAATGTGC AAATTCAGGA TAATGGTGTA GGATTTCCAG AAGAACTTAT GGAAAAGCTT
ACAGAACCTT ATGTTACAAC TCGTGTCCAA GGAACAGGAT TAGGTTTATC CATAGTAAAA
AAGATACTAG ATGAACATAA TGCAACAATA AGTTTCTATA ATATAGAAGA TGGTGGTCTG
GTTAAGTTGA CATTTGTAAA ATGTCAGGAT TGTGAAAATA TTTAA
|
|---|
| Protein sequence | MKGWFIKVYS NISRFQFFKI VASFLAISVF LFLIITYCVV FHHDDPLGPD HSRAIKLVFF
DLILFLLLIA SVSHKLINMW IRRKRGHLGS HLQTKIILMF SVVAVIPTIV ISGFSTLFFN
YSIQAWFNKR VEAVMHESIQ VAEAYLREHK RNIRSDILAI SHYISDHKII LNYDTAALQN
VVQSRADLLG LAEIIIFEPS RIVASNKFSF VLNFDMVPWN DLDRVDNDRI VIIIKENMIR
AFLLLDRFSS TYIMVSRIID RKVISHLSAT KGAVKSYRDL QSQISSLQIQ FSMIFILISL
LLLLTAIWYG INFSGDIVRP LLDLFYATRK VQKGDLSFKI EEGRVGEEMS TLARAFNQMT
SQLSSQRSQL IKLYQDMNER REFIEAVLSG VSSGIIAVNC AGIITLMNDK AKELLAPNDI
LHAELDDVFP EISELIKSSK MHDEITVLRN RKSFTLSVRI KLLGSVNKGY IITFDDISSL
VDAQRSAAWS DVARRIAHEI KNPITPIYLA AERLSSKYQH EIISDKESFG RYIDTIIRHV
TSIRCIVDEF AKFAKMSDPV LIKHDICSVV KELAFSGQFS RGVVHYELDI PSYPIFVVLD
KNQINHVFIN LFKNACESID MKSNSIQGLI KISVVDDRDC VNVQIQDNGV GFPEELMEKL
TEPYVTTRVQ GTGLGLSIVK KILDEHNATI SFYNIEDGGL VKLTFVKCQD CENI
|
|---|
| |