| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0264 |
|---|
| Symbol | |
|---|
| ID | 3927956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 247080 |
|---|
| End bp | 250067 |
|---|
| Gene Length | 2988 bp |
|---|
| Protein Length | 995 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637901388 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_507085 |
|---|
| Protein GI | 88658277 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3164] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA AAAAAAAGTT TATAAGATTA TTTTTTATAC TGATGATCTC TATTGTGTGT
AGTGTATCCT ACCTGTATGT TCGTGATAGA GATGTTATAG AGATTAATGC AAAATTTTTG
AATTTTTATG TAAAACATAA ACTTGCTACG GTTTTTCCTG GTTCTGAGAT AGATATAGGT
AGTACTACGT TAACTTGGCA AAATAAGAGT GAAAATTTTA TATTATCATC ACAAAATCTT
ACTATTAAAA GCCCTAAGCT TGGGGCAAAT ATTACAATAC CTAAGTTCCT GTTATATTCT
AGAGTTGGGA TATTATTTTT GTGGGGAAAT TGTGATTTTT CTTATATTGA TATTCCTAAA
ATCCGTATTG AGTTCTATGA CATTCAAAAA AAAGTTGGAA TAAATCTTGT AGAGAATTCT
GTAAAAATTC TTAAAGATAT GCTGTTAAAG GCAATCAAAC TCGATATACC AGTATTTATT
AGTAATGCTA TTCTTGCTAA ACATGGTAAG GAAGATCTAA TGATAAAACA ACTTAGTGTC
AAAATGAATA AAGGGTATGA TAAAAATACT ATTGATTTTA ATGTCGAAAA TGACAATTCT
TTCATCAGTA TGACAGTGCA TGAACACTAC AAAGGTATAA TGTCTTTTGA GATATCATAT
GGTAATTTTA ATACTAAGGT ATTAGGATAT TTAGGTAATT TAAATGCAAA GCTTCCGCTG
TATGATAATT TAAATTTTAG TGGTGATATT GTATTGAGAA TTGATGAACA TGATGAAATT
ACATATGGTG ATGTAAATAT TCAAAGAATA AAAGGTGTTG TTCCTTGTGT TTCTTCTCGT
AAATGCTACA TCCATGATTT TAGGACTAGA TTAGTATATC AAAATGATAT TCTATCAGTG
AAAAATTTTT TTTTATTGTT AGATCAAAGT AAAATAGTTG CTACTGGAAT GATTGATAAC
GAAAATGTGG ACTTGACTTT TAATTTTGAT GTTATATTTC CAAAGACGCT GTGTGATTAC
TGGTTTGTTA ATTTATATCC TGATTTAAAT CGTTGGTATT GTACTAATGT GACAGACGGA
AAAATTACTG ATCTGAAACT TCAAATTAAA GGAAAACGCG ATGGTATGTT CATCTATAAT
GATCTTTCAA ACTATAATGT TAGTGCAAAT ATAGAAAATG TTTCGATAAA ATTCAACCAT
AATTTTGATC CAGTGCGTAT AGTGCATGGT AAATTATATT TACGTGATAA TCAATTTATT
ATTACTTCTG ATAATTCGGA TTTTAAAGGT GTAGTTATTC AAGATGGAAT ATTAAAAATA
GATAATTTAA AAGATGAAAA TGCAGTGATG ACCATTAGTG GTAGTTCTGT GGGTGACGTA
AAGCAATTAT ATAAAGCTGT AAATAAAGAT GAATTTATAC TGTTAGATAA TAACAAAATT
TTTGGTAAGT CTCATACTAA CTTTGATTTT AAGATATTTA ATTTACTAAA TGACGATATT
GTAGATTATG TATCTTATAT ACATGCACAA ATTGAATCTT TTAAAGCTGG TAGTATTTTG
AATACTTTTG ATGTTTATGA TGCTAAGGTT GATGTTACAT TACATGATAA CGATGTGAAT
ATAAATACTC AGGGTTATAT GAATGGCTTT CCTATGTCTT TGAAAGTGGA TAGAAATTTG
CAAGATAATT ATAAATTTCA CTATGAATTT GCAGGGTATA TTTCAGCGGA CAATATAAAG
GAGTTAGGAA TTTTTGAATA TGGAGATTGT TCAGGAGTAA TGAAGTCAAA CCTTCAATGG
GATATTAATG CCAATAATAC AGTCATTACA GGGGATGTTG ATCTTTCTCA GTTAAAAATT
CACTTTGATG GATTAACACA TAATAATTTT GATAGTGTAG TAAAGTTTTC TGCTTCATTT
CAGGATAAGA AAGAAATTAA AATAGATAGT GCATCTATAG TTGGTAAAGG TGTAGATATA
GAACTCAGTG GTAAAACGGG AGCCAATTTA GAATTATTAT TAAATAAGGT AAAATTGAAA
GATACAGATA TTACAGCTGA GTTAAAGCGG AGTAATGATT CTATTACAGT AAAAGTATTC
GGGGAATCTT TAGATTTAAG TACTGTTGAT TTTTCTGAGA TGATGAAAGG GGAATCTCCG
ATGCAACAAA CTAAAATTGA TGTCAATGTA AGTCGCGTTA TGATGAAAAA TAATGTTGTA
GCTAATAATG TAGATTTCAA ATTAAGTTGT TATGATACTG TTTGTAATGA AATAAAATTG
ACAGGAAATT TTCTAGATAA TAGTAATTTT AGTTTAGAGT ATGGGCCTAT TGGATTAGAA
ATAAATACTG ATAATGCAGG GGAACTTCTT CGTGCGATAG ATATTTTAAA AGTTGTAGAT
AAAGGAAAAT TATCTTTCTA TATGTATCCG GTAAAAGCTG GTGAAATAAC TTCTGGTATG
TTTTCATTAA CAAATTTTCA TCTTGTAAAT GCTTCCATTT TGGCTCAAAT ATTAACATTA
TCCTCACTAA AAGGAGTAGT TAATACATTA AATGGTAAAG GAATATATTT CAATGCATTG
AATGCACCAT TTACTTATCA AGATAACTTA ATAAGTATAG ATGAGTCTTG GATAGAGGGT
TCTGAGTTAG GTATTAGTTT AGGTGGGGAA ATTGATCTAA ATACAAAGAT GTTTAACATA
AAAGGACAAA TAATTCCTGC ATATGTGATT AATAAAATTA TATGGCAAAC TCCAATTATT
GGAAAGTTGT TAACCGGAGG ACAAAGTCGT GGTGTTATCG CTATAGATTA CAAGGTAAAA
GGTACAGATA AAGATCATGA TTTATCAGTC AATTTGATGT CTATTTTGAC ACCTAACTTA
TTAAAAAGGG TATTAAAAAT ATTTGATAGT AAATTGTTAA AAAAAGAGCA TGTCAAGAAA
AGATCATCTG TTAATAAGGT AAATAATCAG GTGAGAATGG TATCATAA
|
|---|
| Protein sequence | MLKKKKFIRL FFILMISIVC SVSYLYVRDR DVIEINAKFL NFYVKHKLAT VFPGSEIDIG
STTLTWQNKS ENFILSSQNL TIKSPKLGAN ITIPKFLLYS RVGILFLWGN CDFSYIDIPK
IRIEFYDIQK KVGINLVENS VKILKDMLLK AIKLDIPVFI SNAILAKHGK EDLMIKQLSV
KMNKGYDKNT IDFNVENDNS FISMTVHEHY KGIMSFEISY GNFNTKVLGY LGNLNAKLPL
YDNLNFSGDI VLRIDEHDEI TYGDVNIQRI KGVVPCVSSR KCYIHDFRTR LVYQNDILSV
KNFFLLLDQS KIVATGMIDN ENVDLTFNFD VIFPKTLCDY WFVNLYPDLN RWYCTNVTDG
KITDLKLQIK GKRDGMFIYN DLSNYNVSAN IENVSIKFNH NFDPVRIVHG KLYLRDNQFI
ITSDNSDFKG VVIQDGILKI DNLKDENAVM TISGSSVGDV KQLYKAVNKD EFILLDNNKI
FGKSHTNFDF KIFNLLNDDI VDYVSYIHAQ IESFKAGSIL NTFDVYDAKV DVTLHDNDVN
INTQGYMNGF PMSLKVDRNL QDNYKFHYEF AGYISADNIK ELGIFEYGDC SGVMKSNLQW
DINANNTVIT GDVDLSQLKI HFDGLTHNNF DSVVKFSASF QDKKEIKIDS ASIVGKGVDI
ELSGKTGANL ELLLNKVKLK DTDITAELKR SNDSITVKVF GESLDLSTVD FSEMMKGESP
MQQTKIDVNV SRVMMKNNVV ANNVDFKLSC YDTVCNEIKL TGNFLDNSNF SLEYGPIGLE
INTDNAGELL RAIDILKVVD KGKLSFYMYP VKAGEITSGM FSLTNFHLVN ASILAQILTL
SSLKGVVNTL NGKGIYFNAL NAPFTYQDNL ISIDESWIEG SELGISLGGE IDLNTKMFNI
KGQIIPAYVI NKIIWQTPII GKLLTGGQSR GVIAIDYKVK GTDKDHDLSV NLMSILTPNL
LKRVLKIFDS KLLKKEHVKK RSSVNKVNNQ VRMVS
|
|---|
| |