Gene ECH_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0220 
SymbolpdhA 
ID3927129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand- 
Start bp207354 
End bp208337 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content34% 
IMG OID637901344 
Productpyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit 
Protein accessionYP_507043 
Protein GI88657641 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.212045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA AATATTCACA TAATCTAACA AATGAACAGC TAGTAAATTG TTACTACAGC 
ATGCTATTAA TGCGCAGGTT TGAAGAGAAG TCCGGTCAAC TTTATGGAAT GGGTTTAATA 
GGAGGTTTTT GTCATTTATA TATAGGACAA GAAGCCATAG CAACAGGAAT ACAAAATGCT 
ATTATTGATG GAGATTCTAT TATTACTAGC TATCGAGATC ACGGGTTCAT GCTTTCTGTA 
GGAACAGATC CAAAATATGT AATGGCAGAA TTAATGGGTA AAAGCACAGG TTGTTCCAAA 
GGTAAAGGTG GATCAATGCA CATGTTTAAC ATAGAAAAGC ATTTTTTTGG AGGTCACGGT 
ATTGTTGGAG CACAAGTACC TATAGGGACA GGGATTGCTC TCGCCAACAA ATACAAAAAA 
AATAACAATG TCGTATTTGT ATGCCTTGGA GATGGAGCAG TGAACCAAGG TCAAGTATAT 
GAATCTTTCA ATATGGCTGC ACTGTGGAAA TTACCAGTAA TATATGTAAT TGAAAATAAT 
GAATATGCAA TGGGTACATC TGTATCCAGA TCATCTTATA TAACAGACTT ATATAAGAAA 
GGAGAAAGTT TTGGTGTACC AGGACATCAA GTAGATGGTA TGGACTTATT TTCTGTAACA 
CAAGCTGCAA CAGATGCAGT AAATTACTGC AGAGCAAACA ATGGTCCAAT ATTATTAGAA 
ATGAAAACCT ACCGCTACAG GGGACATTCT ATGTCAGATC CAGCTAAGTA TCGGTCAAAA 
CAGGAAGTAG AAGAAATAAA AGAACATAAA GATCCTATTA CCAATTTAAA AAACTATCTA 
ATATCTAACA ACATTATATC TGATGATGAA TGCAATAAAT ATGACAAAGA AATACGTAAC 
ATAGTAAAAG AATCCGTAGA TTTTTCACAA AACAGTAGTG AACCTGATGC TAAAATGCTG 
TATACTGACA TTTATAAAGA TTGA
 
Protein sequence
MTKKYSHNLT NEQLVNCYYS MLLMRRFEEK SGQLYGMGLI GGFCHLYIGQ EAIATGIQNA 
IIDGDSIITS YRDHGFMLSV GTDPKYVMAE LMGKSTGCSK GKGGSMHMFN IEKHFFGGHG 
IVGAQVPIGT GIALANKYKK NNNVVFVCLG DGAVNQGQVY ESFNMAALWK LPVIYVIENN 
EYAMGTSVSR SSYITDLYKK GESFGVPGHQ VDGMDLFSVT QAATDAVNYC RANNGPILLE 
MKTYRYRGHS MSDPAKYRSK QEVEEIKEHK DPITNLKNYL ISNNIISDDE CNKYDKEIRN 
IVKESVDFSQ NSSEPDAKML YTDIYKD