| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0193 |
|---|
| Symbol | |
|---|
| ID | 3927694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 184447 |
|---|
| End bp | 185715 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637901317 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_507017 |
|---|
| Protein GI | 88657883 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA GAAGAGCTGT GTTATCGACA ATCATGTGTA ATACTTTAGT ATGGTATGAT
TATGTGTTAT TTGGGAATTT GGTGAGTGTA ATCAGTAAAT TATTTTTTCC AGCAGAAGAT
AGATATTTTA GTCTTATTAT GACATTCAGT ATTTTTGCAG TTGGATTTTT AATGCGTCCT
TTTGGGGCAA GTATTTTTGG TTACATTGGC GATAAATATG GAAGAAAAGC TGCACTGACT
TTATCGATTA TAGCAATATC TGTCCCTATT ACTTTTATCT CAATATTGCC TACCTATGAA
AAAATAGGAA TATTGTCTCC TATATTACTT ATTATTTGTA GGTTGATGCA GGGGATATCT
CTAGGTGGAG AAGCTGGTAA TGCTACTTTC TTAATAGAGC ATTCTAAAAA GGGAAAAAAC
ATTGGTTTTT TTGGTAGTTT TGAGACCCTT AGTGCTGTGC TTGGTTCTAT TATTGCATTA
TTTATGATCT TGTTATCTCA GTACTTTACA GGAGAAAATT TTGAAGTATG GGGTTGGAGA
ATACCTTTTG TAATTGGTTT ATTATTGGGA TTAATTAGTG TTTATATTAG GCGTATTACT
GGTGAAAGTC CTGCGTATGA TACTCATAAA GAAAATAATA ATCTTTCTCA ATCTCCTTTC
TTAGAATTGT TAAAAAAGTA TAAGCGCCCT TTAGTCTTGG CAACATGTAT TGACTGTGTA
GAAAATTGTT CATTTCATAT TTTTATGGTG TTTTTTATTA CATTTATTAA GGAGTTCTCA
AATATTCACC TGAATTTAAA TGCTAATACT ATAAGCATTA TTGAAAGTTT TAATATAATG
ATTTGTGGTA TTTTGAATGT ATTTTTTGGA TATATTTCAG ATTATGTAGG GCGTAGAAAA
GTAATGTTAA TTGCATCTGT GTCATTGTTT TGTGTTGCAA TACCAGTATT TTGGTTATTA
AGTCAAGATA GCTATGTTTC TTTGATTGCT GCATATTTAA TATTTGTAAT TCCGTTTTCT
GCAACTTTAG GTCCAGCAAG TGGTGCAATG TCTGAATTGT TCCCTACAAA AGTTAGATAT
ACTGGTTTTG GATTATCGCG TAACATTGCT TCAGCTATAT CTGGTGGTAT GGCTCCTGTA
GTATGTACAT GGCTTATAAG GGCAACAGGG CTTTCGTTTA TTCCTGGAGT ATATGTTATG
TTTTGGGCAT TGGTTGGAGT TATTGCATTG TGTCAGATCA GAAAAAAAGA TGTTTATGCT
GATTGGTAA
|
|---|
| Protein sequence | MNLRRAVLST IMCNTLVWYD YVLFGNLVSV ISKLFFPAED RYFSLIMTFS IFAVGFLMRP
FGASIFGYIG DKYGRKAALT LSIIAISVPI TFISILPTYE KIGILSPILL IICRLMQGIS
LGGEAGNATF LIEHSKKGKN IGFFGSFETL SAVLGSIIAL FMILLSQYFT GENFEVWGWR
IPFVIGLLLG LISVYIRRIT GESPAYDTHK ENNNLSQSPF LELLKKYKRP LVLATCIDCV
ENCSFHIFMV FFITFIKEFS NIHLNLNANT ISIIESFNIM ICGILNVFFG YISDYVGRRK
VMLIASVSLF CVAIPVFWLL SQDSYVSLIA AYLIFVIPFS ATLGPASGAM SELFPTKVRY
TGFGLSRNIA SAISGGMAPV VCTWLIRATG LSFIPGVYVM FWALVGVIAL CQIRKKDVYA
DW
|
|---|
| |