| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0174 |
|---|
| Symbol | |
|---|
| ID | 3927540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | - |
|---|
| Start bp | 163888 |
|---|
| End bp | 164595 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637901298 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_506999 |
|---|
| Protein GI | 88657859 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.926259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAG TATTTGCTCT AGCTAATATT TACAAATCTT TTGGTAGGAA TAAAGAAGTA
CCAGTTATAG TAAATGCAAC TTTACAAATA AAAAAAGGAG AAATTGTTGC TTTAATAGGT
AAATCAGGAT CAGGCAAAAG TACATTATTA CACATTGCTG GATTACTAGA CACTCCATCT
TCAGGGAGTA TATTGCTCAA TAATATAGAG TGCACAGATA AAACCTCAGA CAAAGATAAA
ACATATTTAC GTCGCCATTT TCTAGGATTC ATTTACCAAT TTCATCATTT ACTACAGGAG
TTTTCAGTAT TAGAAAACGT GATGTTACCA CAAATCATTA CAGGTAAAAG TAAGTCCATT
GCAAAAAAAA ATGCTATGGA AATTTTAGAA CGCGTAAGAC TACAAGATAA ATTGTCAATG
CCAATATCAC AGCTTTCTGG AGGAGAAAGA CAACGCGTTG CAATAGCAAG AAGCTTAATC
AATTGTCCTC TGATAGTTCT AGCAGACGAA CCAACTGGTA GTCTAGATAA CAATACTGCA
CTTGAAGTAT TTTCTTTGCT ACAAGAATAT GCAAAAGAAA AAAATATTGC TATACTCCTT
GCAACACATA ACTACAGCCT AGCTCAAAAA GCATGTCGTA TCGTTAAAAT AGATTCAGGT
ATACTGAGAA GTTATAGCAT TGATGAATCA GGCTTCAACA AAATATAA
|
|---|
| Protein sequence | MSTVFALANI YKSFGRNKEV PVIVNATLQI KKGEIVALIG KSGSGKSTLL HIAGLLDTPS
SGSILLNNIE CTDKTSDKDK TYLRRHFLGF IYQFHHLLQE FSVLENVMLP QIITGKSKSI
AKKNAMEILE RVRLQDKLSM PISQLSGGER QRVAIARSLI NCPLIVLADE PTGSLDNNTA
LEVFSLLQEY AKEKNIAILL ATHNYSLAQK ACRIVKIDSG ILRSYSIDES GFNKI
|
|---|
| |