Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0173 |
Symbol | xerD |
ID | 3927187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 162619 |
End bp | 163548 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637901297 |
Product | tyrosine recombinase XerD |
Protein accession | YP_506998 |
Protein GI | 88658163 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.861385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATC AAAGATATGT AAATATTTTT CTTGAAGCGA TAGTAGCAGA AAAACATGTA TCTCATAATA CTTATCAGAG TTACAGGACT GATTTACTGG GACTCTGCAA ATTTATTGAT AGAAATGACC TTTTGTTGAC AGATGCTAGT ATACACGAAC TGCAAGATTA TATTAGGTTT TTGTATGAGA AGGGATATAA AGCAAATACT GTATCGAGGA AAATATCAGC TATTAAAAAT TTATATGGGT TTTTATATAG AGACAATATC ATTGAGAATG ATCCTACTGT GTATTTGGAT TCTCCTAAAT TGTCCCGTTC TCTTCCGAAA ACGTTAAGTT ATGAAGAAGT AAATATATTA CTTGATGTTG CTGCTTTAGA TGTTTCACCT GATGGAAGAA GGATTAATGC TATTGTTAAT ATATTATATT CTTCAGGTAT ACGGATTTCT GAGTTAGTGT ATTTGAAATT CCGTGAAGTG AGAGAAGCTT TAGATGATGG TGATACAGAA ATATGTCACA TGAAAATTCA AGGGAAAGCA AAAAAAGAGA GGATAATATT GTTAAATTCA TCTGCTGTAA CAAGTATACA AAAATATATG GAAGTTTATG AATATTTTAT TCCAAATGGA TATAAGATGT CACAGTGGTT GTTTCCTGGT ACAAAGTTTG ATAATCCTGT AACAAGACAA AGGGTAGGTC AATTACTAAA GAATTTAGCT ATGAATGCTG GTATCAATGT TACTCATGTT TCTCCTCATA AACTTCGACA TTCTTTTGCG ACACATTTGT TGAATAATGG ATCAGATATT GTTTTTATTC AAAAGATGTT AGGACATGCT AATCTAGCAA CTACACAAAT ATACACTCAT GTTGCGAGTG AAAGATTAAA GAGTATACTA CTAAAATTTC ATCCTTTACG TAATAAATAA
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Protein sequence | MDNQRYVNIF LEAIVAEKHV SHNTYQSYRT DLLGLCKFID RNDLLLTDAS IHELQDYIRF LYEKGYKANT VSRKISAIKN LYGFLYRDNI IENDPTVYLD SPKLSRSLPK TLSYEEVNIL LDVAALDVSP DGRRINAIVN ILYSSGIRIS ELVYLKFREV REALDDGDTE ICHMKIQGKA KKERIILLNS SAVTSIQKYM EVYEYFIPNG YKMSQWLFPG TKFDNPVTRQ RVGQLLKNLA MNAGINVTHV SPHKLRHSFA THLLNNGSDI VFIQKMLGHA NLATTQIYTH VASERLKSIL LKFHPLRNK
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