Gene ECH_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0173 
SymbolxerD 
ID3927187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp162619 
End bp163548 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content31% 
IMG OID637901297 
Producttyrosine recombinase XerD 
Protein accessionYP_506998 
Protein GI88658163 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.861385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATC AAAGATATGT AAATATTTTT CTTGAAGCGA TAGTAGCAGA AAAACATGTA 
TCTCATAATA CTTATCAGAG TTACAGGACT GATTTACTGG GACTCTGCAA ATTTATTGAT
AGAAATGACC TTTTGTTGAC AGATGCTAGT ATACACGAAC TGCAAGATTA TATTAGGTTT
TTGTATGAGA AGGGATATAA AGCAAATACT GTATCGAGGA AAATATCAGC TATTAAAAAT
TTATATGGGT TTTTATATAG AGACAATATC ATTGAGAATG ATCCTACTGT GTATTTGGAT
TCTCCTAAAT TGTCCCGTTC TCTTCCGAAA ACGTTAAGTT ATGAAGAAGT AAATATATTA
CTTGATGTTG CTGCTTTAGA TGTTTCACCT GATGGAAGAA GGATTAATGC TATTGTTAAT
ATATTATATT CTTCAGGTAT ACGGATTTCT GAGTTAGTGT ATTTGAAATT CCGTGAAGTG
AGAGAAGCTT TAGATGATGG TGATACAGAA ATATGTCACA TGAAAATTCA AGGGAAAGCA
AAAAAAGAGA GGATAATATT GTTAAATTCA TCTGCTGTAA CAAGTATACA AAAATATATG
GAAGTTTATG AATATTTTAT TCCAAATGGA TATAAGATGT CACAGTGGTT GTTTCCTGGT
ACAAAGTTTG ATAATCCTGT AACAAGACAA AGGGTAGGTC AATTACTAAA GAATTTAGCT
ATGAATGCTG GTATCAATGT TACTCATGTT TCTCCTCATA AACTTCGACA TTCTTTTGCG
ACACATTTGT TGAATAATGG ATCAGATATT GTTTTTATTC AAAAGATGTT AGGACATGCT
AATCTAGCAA CTACACAAAT ATACACTCAT GTTGCGAGTG AAAGATTAAA GAGTATACTA
CTAAAATTTC ATCCTTTACG TAATAAATAA
 
Protein sequence
MDNQRYVNIF LEAIVAEKHV SHNTYQSYRT DLLGLCKFID RNDLLLTDAS IHELQDYIRF 
LYEKGYKANT VSRKISAIKN LYGFLYRDNI IENDPTVYLD SPKLSRSLPK TLSYEEVNIL
LDVAALDVSP DGRRINAIVN ILYSSGIRIS ELVYLKFREV REALDDGDTE ICHMKIQGKA
KKERIILLNS SAVTSIQKYM EVYEYFIPNG YKMSQWLFPG TKFDNPVTRQ RVGQLLKNLA
MNAGINVTHV SPHKLRHSFA THLLNNGSDI VFIQKMLGHA NLATTQIYTH VASERLKSIL
LKFHPLRNK