Gene ECH_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0144 
SymboldapE 
ID3927929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand- 
Start bp134773 
End bp135918 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content34% 
IMG OID637901268 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_506972 
Protein GI88658597 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.131428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTG ACCCAGTAAT ATTATCCCAA GAATTAATAT CCTTCCCTAG CATTACTCCA 
ACAGATAACG GTGCCATAGA CTTTCTATCA AACACTCTAT CACAATATGG ATTCACATGT 
AATGTTTTAA CTTTTGGAAA TGATGAAGTG CAAGTATGTA ATTTATATGC ACAATTAGGA 
AATGGTCATC CTAATCTATG TTTTGCAGGA CATACAGATG TAGTCCCAAC AGGAGACTTA 
GAAAAATGGA AATTTGACCC TTTTTCTGGG CACATAGAAG ATAACATTCT ATATGGGCGT 
GGAGCTGTTG ATATGAAATC TGCCATATGC GCCTTCATAG CAGCAGTATC AAGAATAGAT 
TTCAATCAAG TAAATGGTGC TATTAGTCTA ATGATTTCTG GAGATGAAGA AGGTAACCAT 
TTTAAATATG GGACACCTGC AATATTGAAA TGGCTAACCG ATAATAATAA AAAAATTGAT 
TACTGTTTAG TTGGAGAACC AACAAGTAAA TCCTCTGTAG GAGATACTAT AAAAATAGGT 
CGTAGAGGGT CAATCAATTT CAAGATAGTG TGTAATGGTG TACAAGGGCA TGTTGCCTAT 
CCACACCTTG CACAAAATCC AATAAATGAT ATGATCAACA TTTTACATAA AATAAACAAT 
ACAGTTCTCG ATGAAGGGAA TGAATATTTT CAACCTTCAA ATTGCGAAAT TACATCTGTT 
GATGTGGGAA ATACAGCAAA TAACGTTATT CCAGGCACAG TTACCGCTCA TCTTAACATT 
AGATATAATA ATATACACAC CTCTGAATCA TTATTTAATA TAATCAACAA TATTTGTGCT 
GAAACAACAC AAAAATACCA AATATTTACA TCATTATCTG GAGATCCATT CATTAATTAC 
CCTGACAAAT ATTCTGATAT GCTATCTGCA GCCATAAAAA AGACAACTGG GGAAACTGCA 
GTAATAAGTA CATCTGGTGG CACATCAGAT GCAAGGTTTA TAAAAGATTT TTGTCCTGTG 
ATTGAGCTAG GATTAAAAAA TGATACCGCA CATAAAATAA ACGAAAATAC ATCTGTAGAT 
GACATAAACA AACTGGCTAA CATATACGAA GAGTTCATAA AGCAGTTTTT TAATATATCT 
CAGTAG
 
Protein sequence
MAIDPVILSQ ELISFPSITP TDNGAIDFLS NTLSQYGFTC NVLTFGNDEV QVCNLYAQLG 
NGHPNLCFAG HTDVVPTGDL EKWKFDPFSG HIEDNILYGR GAVDMKSAIC AFIAAVSRID 
FNQVNGAISL MISGDEEGNH FKYGTPAILK WLTDNNKKID YCLVGEPTSK SSVGDTIKIG 
RRGSINFKIV CNGVQGHVAY PHLAQNPIND MINILHKINN TVLDEGNEYF QPSNCEITSV 
DVGNTANNVI PGTVTAHLNI RYNNIHTSES LFNIINNICA ETTQKYQIFT SLSGDPFINY 
PDKYSDMLSA AIKKTTGETA VISTSGGTSD ARFIKDFCPV IELGLKNDTA HKINENTSVD 
DINKLANIYE EFIKQFFNIS Q