| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0060 |
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| Symbol | trmE |
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| ID | 3927317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | + |
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| Start bp | 52852 |
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| End bp | 54171 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637901184 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_506891 |
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| Protein GI | 88658612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.646746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTACAA TTTTTGCTTT ATGTACTCCA TGGGGAAGGT CTGGAGTAGC TGTGATTAGA
ATCTCTGGTG AAGATGCTGC AAAGGCATTT GTGCATTTTG GAATTAATAG TAGTATTAAA
CCAAGAACTG CAACGTTTAC TCCTTTATAC GACAAAGATG GTGAAGTTAT AGATGAAGCG
ATAGTGGTGT ATTTTGTTGC ACCAAATAGC TTTACTGGAG AAGATGTAGT TGAGTTTCAT
ACTCATGGTA GTTTTGCTGT TATTAAAATG ATATTAGCTG AGCTTGGAAA AATTTTTGTT
CCTGCTGGGC CAGGTGAGTT TTCTTTGCGT GCTTTTTTAA ATAATAAAGT TGATTTGACT
AGAGCTGAAG CAATAGTAGA TCTTATAAAC TCTGAAACAG AAATGCAGGC TAAGCAAGCT
ATAAGACAAA TGTCTGGGGT TTTGGAAAAG TTGTATCAAA ATTGGCGACA GCAGTTGATT
GATATATTAT CTAATATAGA AGCTTATATT GATTTTCCGG AAGAAGTTAA TAGTTCTGCT
ATAGCTAATA TTGATTATCT ATTAAATAAT TTGCAGAAAT CTTTAGAAAG TCATCTTAAT
GATGACCGAA GAGGTGAAAG GTTACGTCAA GGTATTTATG TTACAATTCT TGGTGAACCT
AATTCTGGTA AGTCTACTTT ATTTAATCAT TTAGCAAAAA GAGATATTGC AATTGTTTCT
GAATATGCTG GTACTACTAG AGATCCTCTA GAAGCACATA TAGATGTAGC TGGATATCCA
ATTATTATTA TTGATACTGC AGGCATTAGA GAGAGTACTG ATCCAGTAGA ACAAGAAGGG
ATCAAACGTG CGAAGTTAAA GGCTGAAAAT GCTGATTTCA AAATAGTAAT GCTTCCTTAC
GAGAAACGAG ATATTTTTAA CAGAGAAATT ATGAGCTTGA TAGATGATAA GTCTATATGC
ATTTTAAGTA AAGCTGATAA TATTACAGAT CAGAAATTAA TACCTGTGTT TGATTTTAGT
TTTATTCCGA TTTCTGTATA TTGTAACATT GGAATTGAAA ATTTATTGAA TTTAATTAAA
CAAAAAGTAG AAAAAGATTT TCAATTTTGT AATACTGACC CTTTTATTAC TTCTGAAAGG
CAGAGAAAAC ATATTCAAAA TACTTTGAAT ATTATAAAGT CTGTAGATTT AAGTTTACCT
ATGGAAATAG TGTCAGAGGA TTTAAGATTG TCTGTAAGGG AATTAGGGAA AGTGGTAGGT
GTTATTAGTG ATGATGATAT ATTAGATAAT GTATTTGGTA AATTCTGTAT AGGTAAATGA
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| Protein sequence | MTTIFALCTP WGRSGVAVIR ISGEDAAKAF VHFGINSSIK PRTATFTPLY DKDGEVIDEA
IVVYFVAPNS FTGEDVVEFH THGSFAVIKM ILAELGKIFV PAGPGEFSLR AFLNNKVDLT
RAEAIVDLIN SETEMQAKQA IRQMSGVLEK LYQNWRQQLI DILSNIEAYI DFPEEVNSSA
IANIDYLLNN LQKSLESHLN DDRRGERLRQ GIYVTILGEP NSGKSTLFNH LAKRDIAIVS
EYAGTTRDPL EAHIDVAGYP IIIIDTAGIR ESTDPVEQEG IKRAKLKAEN ADFKIVMLPY
EKRDIFNREI MSLIDDKSIC ILSKADNITD QKLIPVFDFS FIPISVYCNI GIENLLNLIK
QKVEKDFQFC NTDPFITSER QRKHIQNTLN IIKSVDLSLP MEIVSEDLRL SVRELGKVVG
VISDDDILDN VFGKFCIGK
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