Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0043 |
Symbol | virB9-1 |
ID | 3927881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | - |
Start bp | 40660 |
End bp | 41481 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637901167 |
Product | type IV secretion system protein VirB9 |
Protein accession | YP_506875 |
Protein GI | 88658647 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAATT TCTATAAAAT CTATACAATA CTACTATTAG TTTTAGTAAT GATGTTTAAC AGCAGTGCAT ATGCCATCAA CAGGGTTGAT AATCCTGTAA CAGTAGACAG TAGGATTAAA ACTTTCGTAT ACAGTAATAA TGAAATCTAT AATGTAGTTT TTAACTATGG TTACCACTCG TACATTGAAT TTTCAAAAGG TGAAACTATC AAAATGTTAG CAATGGGTAA CACTGTAAGC TGGAAAGTAA AACCAGTTGG TAACAAACTA TTCATAATGC CATTAGAAAA AAACGGAAGA ACAAATATGT TAATAGAAAC AAACAAAGGA AGAAGTTATG CCTTTGACCT TATATGTCGT AGTGCAAATG AATCTAGTGA TGACAATAAT GACCAAGCAG GCTATTCTGA TCTAATAGAT TTAACATATA TAGTACGTTT CTACTATCCA AAAACCGAAG AAGATTTCGA ACTAAATCAA GTAAAGCTGC CAGACATTTC TGTGCCTAGT GCAGTACAAA AAATAAAAAA GCATGTTGTA ATAAAACCTA ACAATACAAG TAATCACTAT ATTTTAGAGA CAAAATCAGA AAATCAAAAC ATACTACCTG TAGAATTATT TGATGACGGA AAACTTACAT ATTTTAAGTT CTCAAATGAT AACCAAATTA TTCCACAAAT TTTCATATAC AATAACTCTG AGAAAAAAGT ACCTTGCAAA ATGTTATTAT TACAAAATTA TGTAATAATA AAGGGTGTAC ATAAGAACTT ATATCTAGAA TATAAAAGTG AATCTGTAAA AATTACTAAT AAAAAATTAT AA
|
Protein sequence | MMNFYKIYTI LLLVLVMMFN SSAYAINRVD NPVTVDSRIK TFVYSNNEIY NVVFNYGYHS YIEFSKGETI KMLAMGNTVS WKVKPVGNKL FIMPLEKNGR TNMLIETNKG RSYAFDLICR SANESSDDNN DQAGYSDLID LTYIVRFYYP KTEEDFELNQ VKLPDISVPS AVQKIKKHVV IKPNNTSNHY ILETKSENQN ILPVELFDDG KLTYFKFSND NQIIPQIFIY NNSEKKVPCK MLLLQNYVII KGVHKNLYLE YKSESVKITN KKL
|
| |