Gene ECH_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0043 
SymbolvirB9-1 
ID3927881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp40660 
End bp41481 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content28% 
IMG OID637901167 
Producttype IV secretion system protein VirB9 
Protein accessionYP_506875 
Protein GI88658647 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATT TCTATAAAAT CTATACAATA CTACTATTAG TTTTAGTAAT GATGTTTAAC 
AGCAGTGCAT ATGCCATCAA CAGGGTTGAT AATCCTGTAA CAGTAGACAG TAGGATTAAA
ACTTTCGTAT ACAGTAATAA TGAAATCTAT AATGTAGTTT TTAACTATGG TTACCACTCG
TACATTGAAT TTTCAAAAGG TGAAACTATC AAAATGTTAG CAATGGGTAA CACTGTAAGC
TGGAAAGTAA AACCAGTTGG TAACAAACTA TTCATAATGC CATTAGAAAA AAACGGAAGA
ACAAATATGT TAATAGAAAC AAACAAAGGA AGAAGTTATG CCTTTGACCT TATATGTCGT
AGTGCAAATG AATCTAGTGA TGACAATAAT GACCAAGCAG GCTATTCTGA TCTAATAGAT
TTAACATATA TAGTACGTTT CTACTATCCA AAAACCGAAG AAGATTTCGA ACTAAATCAA
GTAAAGCTGC CAGACATTTC TGTGCCTAGT GCAGTACAAA AAATAAAAAA GCATGTTGTA
ATAAAACCTA ACAATACAAG TAATCACTAT ATTTTAGAGA CAAAATCAGA AAATCAAAAC
ATACTACCTG TAGAATTATT TGATGACGGA AAACTTACAT ATTTTAAGTT CTCAAATGAT
AACCAAATTA TTCCACAAAT TTTCATATAC AATAACTCTG AGAAAAAAGT ACCTTGCAAA
ATGTTATTAT TACAAAATTA TGTAATAATA AAGGGTGTAC ATAAGAACTT ATATCTAGAA
TATAAAAGTG AATCTGTAAA AATTACTAAT AAAAAATTAT AA
 
Protein sequence
MMNFYKIYTI LLLVLVMMFN SSAYAINRVD NPVTVDSRIK TFVYSNNEIY NVVFNYGYHS 
YIEFSKGETI KMLAMGNTVS WKVKPVGNKL FIMPLEKNGR TNMLIETNKG RSYAFDLICR
SANESSDDNN DQAGYSDLID LTYIVRFYYP KTEEDFELNQ VKLPDISVPS AVQKIKKHVV
IKPNNTSNHY ILETKSENQN ILPVELFDDG KLTYFKFSND NQIIPQIFIY NNSEKKVPCK
MLLLQNYVII KGVHKNLYLE YKSESVKITN KKL