Gene ECH_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0041 
SymbolvirB11 
ID3927351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp38281 
End bp39279 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content34% 
IMG OID637901165 
Producttype IV secretion system ATPase VirB11 
Protein accessionYP_506873 
Protein GI88658241 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID[TIGR02788] P-type DNA transfer ATPase VirB11 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA GCTATGCCGC CTTAGATACG TATCTCGAAC CACTACAATC CATCTTTCAT 
GAAGATGGGG TAAATGAAGT ATCTATTAAC CAGGAATGTG AAGTATGGAT AGAAAACAGA
GGAAATATAC GTTGTGAATC CATTCCGACC CTAAATTTAT CGCATTTAAA AGCATTAGGC
AGACTAATAG CACAAGCTAC AGAACAAAAG ATAAGCGAAG AAAATCCATT ATTATCAGCA
ACTTTACCTA ATGGCTATCG TATACAAATC GTATTTCCTC CAGCCTGTGA AGCAACCACA
GTAGTCATGT CAATTAGAAA ACCATCAGCA ATGCAACTTT CATTAGATGA CTATGAAAAA
ATGGGCGCAT TTAACCAAGC TGTAACAGAA ACTCAAGAAA ATAATACAGA TAATCAATTA
AAAGAACTAT TAAAGCAAAA AAAGATCAAG CAATTTCTAG AACATGCTAT AATAAACAAA
AAAAACATAA TAATTAGTGG TGGTACATCA ACAGGAAAAA CAACTTTTAC CAATGCAGCA
TTACGAAGTA TACCTCAGAA TGAAAGGCTA ATAACAGTAG AAGATGCAAG AGAAATTGTT
TTAAGTAATC ATCCAAACAG AGTCCATTTA ATTGCCTCAA AAGGAGGACA AGGTAGAGCT
AAAGTCAGCA CTCAAGATTT AATAGAGGCA TGTCTAAGAT TGCGTCCAGA TAGGATAATA
GTAGGAGAAT TACGTGGATC TGAAGCATTT AGCTTTTTAA GAGCAATTAA TACAGGCCAT
CCTGGTTCCA TATCAACGTT ACACGCTGAC ACACCAATGA TGGCACTAGA ACAATTAAAA
TTAATGGTTA TGCAAGCAGG ACTTGGCATA CCTCCAGATC AAATAATTAA TTACATCACT
AATATAGTAG ATATTGTAAT ACAGTTAAAA AGAGGATCAG AGGGTAAAAG GTATGTATCA
GAAATATTAT TCACTAAATC TTTACAGAAA AATGGTTAA
 
Protein sequence
MTTSYAALDT YLEPLQSIFH EDGVNEVSIN QECEVWIENR GNIRCESIPT LNLSHLKALG 
RLIAQATEQK ISEENPLLSA TLPNGYRIQI VFPPACEATT VVMSIRKPSA MQLSLDDYEK
MGAFNQAVTE TQENNTDNQL KELLKQKKIK QFLEHAIINK KNIIISGGTS TGKTTFTNAA
LRSIPQNERL ITVEDAREIV LSNHPNRVHL IASKGGQGRA KVSTQDLIEA CLRLRPDRII
VGELRGSEAF SFLRAINTGH PGSISTLHAD TPMMALEQLK LMVMQAGLGI PPDQIINYIT
NIVDIVIQLK RGSEGKRYVS EILFTKSLQK NG