| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0040 |
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| Symbol | virD4 |
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| ID | 3927074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 36100 |
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| End bp | 38244 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637901164 |
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| Product | type IV secretion system component VirD4 |
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| Protein accession | YP_506872 |
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| Protein GI | 88657566 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGTG TAAGTGCAAA CCACATACGT AATATTTTAT TCCTGGTCTT AGGAGCATTC
TTCGGGTTGG AATTTTGCTT TTATCTATCA GGGGTTTTAT TTATCTTAAT GGTATGGGGA
CCAGACTATC TAGATTTCAA CGCTATAAAT CCTAGTTTCA GCGACTTTCC AGACAGAATT
TGGCCTACTG TTTTTAATTA CGTAGAACAC TGGTGGCATA ATCCTTCTTC ATACGATGCA
ATACTATTAG TAAAGTTAAT ATCATCACTA TGTATACCAA TAGGTATCCT AAGTATAGTA
TTGTGGAATT TAAGAAACAT ACTATTCGAT TGGAGACCAT TTAAAAAGAA AGAATCATTA
CATGGAGATT CAAGATGGGC AACAGAAAAA GATATTCGAA AAATAGGATT ACGTAGTAGA
AAAGGTATAC TACTAGGAAA AGACAAAAGA GGTTATCTTA TTGCTGATGG ATTTCAACAT
GCTTTACTAT TTGCACCAAC CGGATCTGGG AAAGGTGTAG GTTTTGTAAT ACCAAACTTA
TTGTTTTGGG AAGACTCTGT AATAGTACAT GACATAAAAT TAGAAAACTA TGATCTCACA
AGTGGATGGA GGAAAAAAAG AGGACAAGAA GTATTTGTGT GGAATCCAGC TCAACCTGAT
GGGGTAAGTC ACTGTTACAA TCCATTGGAT TGGATAAGCT CTAAACCAGG ACAAATGGTG
GATGATGTAC AAAAAATCGC CAATCTAATA ATGCCTGAAC AAGACTTTTG GTACAACGAA
GCACGTAGTT TATTTGTAGG AGTAGTATTA TATCTACTAG CAGTACCAGA AAAAGTAAAA
TCCTTTGGAG AAGTTGTACG AACAATGCGT AGTGATGACG TAGTCTACAA CTTGGCAGTT
GTATTAGACA CTATAGGGAA AAAAATTCAC CCAGTTGCAT ATATGAATAT AGCTGCATTC
TTACAAAAAG CTGATAAAGA GCGTTCAGGT GTAGTATCAA CTATGAACTC ATCTTTAGAA
TTATGGGCAA ACCCGTTAAT AGATACAGCA ACAGCTTCAA GTGATTTTAA TATTCAAGAA
TTTAAAAGAA AAAAAGTAAC AGTATATGTT GGATTAACAC CAGACAACTT AACTCGTCTT
AGGCCTTTAA TGCAGGTATT CTATCAGCAA GCAACAGAGT TTTTATGTCG AACTTTACCA
TCGGATGATG AACCTTACGG TGTATTGTTT TTAATGGATG AGTTTCCAAC ATTAGGAAAG
ATGGAGCAAT TTCAAACTGG TATTGCATAT TTCCGTGGAT ATAGAGTTAG ATTATTTTTG
ATTATCCAAG ACACTGAACA GCTTAAAGGT ATATATGAGG AAGCAGGAAT GAACTCATTT
CTGTCAAATT CTACTTATAG AATTACTTTT GCAGCAAACA ATATTGAAAC TGCAAACCTA
ATATCACAGC TAATAGGCAA TAAAACAGTT AATCAGGAAT CTTTAAATAG ACCTAAATTT
TTAGATTTAA ACCCTGCCTC TCGTTCATTA CACATATCAG AAACACAAAG AGCGTTATTA
TTACCTCAAG AAGTTATAAT GTTACCTAGA GATGAACAAA TACTTTTAAT AGAGTCTACT
TATCCTATAA AATCAAAAAA AATAAAATAT TATGAAGACA AAAACTTTAC AAAAAAATTA
TTGAAAAGCA CTTTCGTACC TACTCAAGAA CCTTACGATC CTAATAATGT AAAAATAACA
AAAAAAGAAA ATGAAGACCC TATCCCTAGT ATTGAAAGTG ATATTCCTGA AAACAAACCT
AACAACACTG AAAATAATCT AACAGAAGAA GGTGCTATAT ATAACAGTAC AGAAACAAAT
TATGAAGATG ATGAAGACGA AGATGATGAT TTTAACTTCG ATGATTTAGA TGAGTACATA
GATGAAGATG AAGAGTACAG CGAACAGCCT GAAGAAGACT ATGACTATAC CGATGAAGAA
GATGAAGATG AAGAAGAAGA TGAAGAAGAC AACGATTACA ACAATAGTAA TGAAGATGAT
GACTATGAAA ATAATAATAT AAGCAACTCA CACCATGAAA ATGATTTTGA CAATCACAAT
GAAAAACCTG TCAAGGATCA AGATATAAAA AATGATAAAC AGTAA
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| Protein sequence | MDSVSANHIR NILFLVLGAF FGLEFCFYLS GVLFILMVWG PDYLDFNAIN PSFSDFPDRI
WPTVFNYVEH WWHNPSSYDA ILLVKLISSL CIPIGILSIV LWNLRNILFD WRPFKKKESL
HGDSRWATEK DIRKIGLRSR KGILLGKDKR GYLIADGFQH ALLFAPTGSG KGVGFVIPNL
LFWEDSVIVH DIKLENYDLT SGWRKKRGQE VFVWNPAQPD GVSHCYNPLD WISSKPGQMV
DDVQKIANLI MPEQDFWYNE ARSLFVGVVL YLLAVPEKVK SFGEVVRTMR SDDVVYNLAV
VLDTIGKKIH PVAYMNIAAF LQKADKERSG VVSTMNSSLE LWANPLIDTA TASSDFNIQE
FKRKKVTVYV GLTPDNLTRL RPLMQVFYQQ ATEFLCRTLP SDDEPYGVLF LMDEFPTLGK
MEQFQTGIAY FRGYRVRLFL IIQDTEQLKG IYEEAGMNSF LSNSTYRITF AANNIETANL
ISQLIGNKTV NQESLNRPKF LDLNPASRSL HISETQRALL LPQEVIMLPR DEQILLIEST
YPIKSKKIKY YEDKNFTKKL LKSTFVPTQE PYDPNNVKIT KKENEDPIPS IESDIPENKP
NNTENNLTEE GAIYNSTETN YEDDEDEDDD FNFDDLDEYI DEDEEYSEQP EEDYDYTDEE
DEDEEEDEED NDYNNSNEDD DYENNNISNS HHENDFDNHN EKPVKDQDIK NDKQ
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