Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0012 |
Symbol | |
ID | 3927149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | - |
Start bp | 10164 |
End bp | 10829 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637901137 |
Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
Protein accession | YP_506847 |
Protein GI | 88658510 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0240754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAA ATTCTGCTGT TATTTTAGCT GGTTGTGGTC ATATGGATGG TTCAGAGATC AGAGAGGCTG TTTTAGTTAT GCTTGAACTT GATAGGCATA ATGTAAATTT TAAATGTTTT GCACCAAATA AAAATCAAAA ACAAGTTGTA GATCATAAAA AGAAGGAATC GGTAGGAGAA GTAAGAAACA TTTTGGTTGA ATCTGCAAGA ATAGCTAGAG GTTCTGTATA TGATATAGAA CAAATTAGAG TAGAAGAGTT TGATATGTTA GTAATTCCTG GTGGCTATGG AGTAGCAAAA AATTTTTCTA ACTTATTTGA TGAAGATAAG GAAAATGATT ATATACTACC TGAATTTAAA AATGCTGTGC GTGAGTTTTA TAATGCTAAA AAACCTATAG GGGCAGTTTG TATATCACCT GCAGTAGTAG TTGCATTATT AAAAGATATT GCAAAGGTTA AGGTGACAAT AGGAGAAGAC TCTAATGGTT TAATAGATAA AATGGGAGGA GTTCATGTTG ATTGTCCTAC TATTAAATCT GTTAAGGATG ATGTAAACAG AATATTTTCT TGTTCTGCGT ATATGAGGAA TGATAGCCTT TATAATGTAT ATCTTGGGAT ACAAGACATG ATATCATCCA TGGTAAATTA TCTAAAAAGT AAGTAA
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Protein sequence | MALNSAVILA GCGHMDGSEI REAVLVMLEL DRHNVNFKCF APNKNQKQVV DHKKKESVGE VRNILVESAR IARGSVYDIE QIRVEEFDML VIPGGYGVAK NFSNLFDEDK ENDYILPEFK NAVREFYNAK KPIGAVCISP AVVVALLKDI AKVKVTIGED SNGLIDKMGG VHVDCPTIKS VKDDVNRIFS CSAYMRNDSL YNVYLGIQDM ISSMVNYLKS K
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