Gene ECH_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0012 
Symbol 
ID3927149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp10164 
End bp10829 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content31% 
IMG OID637901137 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_506847 
Protein GI88658510 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0240754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAA ATTCTGCTGT TATTTTAGCT GGTTGTGGTC ATATGGATGG TTCAGAGATC 
AGAGAGGCTG TTTTAGTTAT GCTTGAACTT GATAGGCATA ATGTAAATTT TAAATGTTTT
GCACCAAATA AAAATCAAAA ACAAGTTGTA GATCATAAAA AGAAGGAATC GGTAGGAGAA
GTAAGAAACA TTTTGGTTGA ATCTGCAAGA ATAGCTAGAG GTTCTGTATA TGATATAGAA
CAAATTAGAG TAGAAGAGTT TGATATGTTA GTAATTCCTG GTGGCTATGG AGTAGCAAAA
AATTTTTCTA ACTTATTTGA TGAAGATAAG GAAAATGATT ATATACTACC TGAATTTAAA
AATGCTGTGC GTGAGTTTTA TAATGCTAAA AAACCTATAG GGGCAGTTTG TATATCACCT
GCAGTAGTAG TTGCATTATT AAAAGATATT GCAAAGGTTA AGGTGACAAT AGGAGAAGAC
TCTAATGGTT TAATAGATAA AATGGGAGGA GTTCATGTTG ATTGTCCTAC TATTAAATCT
GTTAAGGATG ATGTAAACAG AATATTTTCT TGTTCTGCGT ATATGAGGAA TGATAGCCTT
TATAATGTAT ATCTTGGGAT ACAAGACATG ATATCATCCA TGGTAAATTA TCTAAAAAGT
AAGTAA
 
Protein sequence
MALNSAVILA GCGHMDGSEI REAVLVMLEL DRHNVNFKCF APNKNQKQVV DHKKKESVGE 
VRNILVESAR IARGSVYDIE QIRVEEFDML VIPGGYGVAK NFSNLFDEDK ENDYILPEFK
NAVREFYNAK KPIGAVCISP AVVVALLKDI AKVKVTIGED SNGLIDKMGG VHVDCPTIKS
VKDDVNRIFS CSAYMRNDSL YNVYLGIQDM ISSMVNYLKS K