| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0947 |
|---|
| Symbol | tsf |
|---|
| ID | 3932029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 834437 |
|---|
| End bp | 835309 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637901101 |
|---|
| Product | translation elongation factor Ts |
|---|
| Protein accession | YP_506811 |
|---|
| Protein GI | 88608372 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.168966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGA TAAACTTGGA AGATCTAAAA AGTTTGTCAA AGGAGACTTC TGCTGGTTTG
GTCCATTGCA AGCAGGCTCT GAGCGAGGCG CATGGTGATC TGACTAGAGC AAGGGAAATA
CTAAAGGAGT TAGGGCATGC GGTTTCTGTG AAGAAGGCCA ATAGGGGTGC TCGAGATGGT
GTCGTTGGGG CTCTCTCTTC TGGAAAATTT GGTGTTATAC TTGAGCTGAA TTGCGAGACG
GACTTTGTTG CACGTAATGA AAAATTTCAG CAGTTCGCAC AGTCGGTGCT TGAAGCTGCG
TGTGCTGCCA AAGTCAAGTC AGTTGAAGAG TGTCTTAGTA CTCCGTTGCC AGGAGGTCAA
AAGGTCCGCG ACGCAATAGT GGAGCAAGTC GCAGTTTTTA GGGAGAATAT AGTTCTTTCG
AGGTGTGTTA CTTACGAGGT TTCTCAGAGT GGTTTGTTGG GTGTCTATGT TCACAACAAG
TACACCGAAA ATCTTGGTAA GATAGGTGTT GCAGTTGCGG TGGTGTCAGA AGCTGATCCT
TCCTTTCTTT CCACTGTTGC AAAAGATATT GCTATTCAGG TGATGTCGGA GTGTCCATGC
GCAATCGATG TCGCTCGTAT ACCACCAAAC CTTCTTGAAT CTGAAAAGCA CAAATACAAT
CTGGAGGTCG AGGGAAAGCC TGCTTCGGTT GCTGAAAAAA TTATTGCTGG CAAACTGAGT
AAATTCTATA AAAAAGTTGT CCTCCTAGAA CAGCCTCTAT TTTCAGATCC TGAGAGGTCC
GTAAAGCAAT ATATTTCTGA CAAGGAAATG GAATCTTCAG CTAAGATTGA TGTAGTTTGG
TATGAGGTGT TTGTTCTAGG AGAAGCTAGT TGA
|
|---|
| Protein sequence | MSKINLEDLK SLSKETSAGL VHCKQALSEA HGDLTRAREI LKELGHAVSV KKANRGARDG
VVGALSSGKF GVILELNCET DFVARNEKFQ QFAQSVLEAA CAAKVKSVEE CLSTPLPGGQ
KVRDAIVEQV AVFRENIVLS RCVTYEVSQS GLLGVYVHNK YTENLGKIGV AVAVVSEADP
SFLSTVAKDI AIQVMSECPC AIDVARIPPN LLESEKHKYN LEVEGKPASV AEKIIAGKLS
KFYKKVVLLE QPLFSDPERS VKQYISDKEM ESSAKIDVVW YEVFVLGEAS
|
|---|
| |