Gene NSE_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0942 
Symbol 
ID3931818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand- 
Start bp831656 
End bp832273 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content42% 
IMG OID637901096 
Productputative phosphatidate cytidylyltransferase 
Protein accessionYP_506806 
Protein GI88608452 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0168079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT ATTGCGATTT GAAGGCCAGG GTTATCTCTG CGGCAGTACT GCTTTTTTTG 
TGTGCCTTGG CAATCTGCAG TGGTGGCTAT GCTGTATACT CAAGTGTATT ACTTTTAGCA 
GTGCTTTCGT ATCAGGAATG GCAGGATATG ACAGCGAATA AGGGGGTTGT GTTAAGATGC 
CTTGGTTTGT TTGTGGCAAT TTTACCCAAC GCAGCACTTA TAGGTATACA TATTGAAGAT 
GTAGAGATTC TTATTTGGTT GATAGTTTGT GTTGTAAGTA ATGACGTGGG TGCCTATTTT 
ATCGGACGCA TCATAGGTGG TGTTAAACTT TGCAAGAGTG TCAGTCCAAA TAAGACCGTA 
AGTGGTTTCC TTGGAGGACT CCTATCCACC TTTGTTTGCG GTTCTACTTT TGCAATAGTT 
CTTGGACTGA GTATGAATTT TGTTCTTTTG ACCCTTCCAA TTGCTGTTTT GGCGACTATA 
GGTGATCTAT TTGAATCGTT TATAAAGCGT ACGTGCTCAG TGAAGGATAG CGGAACGCTG 
CTACCAGGAC ACGGAGGTAT ACTGGACCGT GTCGATGGAT TCATTTTTTC GGCACCCTTC 
CTGTTCTTTT GTCTTTGA
 
Protein sequence
MKHYCDLKAR VISAAVLLFL CALAICSGGY AVYSSVLLLA VLSYQEWQDM TANKGVVLRC 
LGLFVAILPN AALIGIHIED VEILIWLIVC VVSNDVGAYF IGRIIGGVKL CKSVSPNKTV 
SGFLGGLLST FVCGSTFAIV LGLSMNFVLL TLPIAVLATI GDLFESFIKR TCSVKDSGTL 
LPGHGGILDR VDGFIFSAPF LFFCL