Gene NSE_0900 details

Gene Information

• Locus tag: NSE_0900
• ID: 3932116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 801997
• End bp: 802689
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637901055
• Product: hypothetical protein
• Protein accession: YP_506766
• Protein GI: 88608124
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1651] Protein-disulfide isomerase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000692645
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTGTATGT CTTATAAGTT GTTTCTGTGC GGCTTAGTTG CTCTGATTTC TTTTTCGCTT 
GCTTTTTCTG CACCATCGTC CTTACACTCC GATGCATTAA AATTCAATCC TAGAACAGTT 
AAGCTAAGTG AAAACCTTCT TTTTCCCGCT GATCTACCTA TAGGTGGTAT AGATGCGCCC 
ATTACTATAG TTGATTACTC GTCCTTCTCG TGTACACACT GCAAGGCTGC CTTTGAAAGG 
CTTATCCTGC CTACGTATGA AAAATACGTT AGGACGGGCA AAGTCATGCT AATCATGAGG 
GACTTTCCGC TTGATAAGTT GTCGTTCGAT GCATCTGTTT TCCTTGGGTG CTATCGTAAA 
ACCATAATGC CTGATGACGA ACGCGTGATC AAACTAATAA CAAAACTCTT TGATATCGGA 
AATGGCTCAA AAAACAAGGA AGATGCCGGA AAAGCGTTTG ACGGTATTGT TTCGGATTCG 
AATCTTCAGG GGAACACAAA AGAGAAGTTT CTCTCCTGCG TGGAGGACCT TGGTGTCAAG 
GATGATGTTT TATATTCAAA GCTGTTCGGA ATCAAGAAGA TAGGTATTGA CGGTACCCCG 
ATGATTTTCA TCAATGGTGA GAGGTACACG GGACCTTTTA AGTTTTCTTC TTTTGAGAAG 
AAGATAGAAA AGATCCTGAA CAATAGCAGG TAA 

 

Protein sequence

MCMSYKLFLC GLVALISFSL AFSAPSSLHS DALKFNPRTV KLSENLLFPA DLPIGGIDAP 
ITIVDYSSFS CTHCKAAFER LILPTYEKYV RTGKVMLIMR DFPLDKLSFD ASVFLGCYRK 
TIMPDDERVI KLITKLFDIG NGSKNKEDAG KAFDGIVSDS NLQGNTKEKF LSCVEDLGVK 
DDVLYSKLFG IKKIGIDGTP MIFINGERYT GPFKFSSFEK KIEKILNNSR