| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0896 |
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| Symbol | trmD |
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| ID | 3931442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 799941 |
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| End bp | 800618 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637901051 |
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| Product | tRNA (guanine-N1)-methyltransferase |
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| Protein accession | YP_506762 |
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| Protein GI | 88608142 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000113449 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGCTTTG TCGTCCTGAC AATGTTTCCA GAGGTTTTTC CTGGGCCTTT GGGCGTGTCT
GTAATCGGTA GAGGGTTGGC CAATGGGTAT TGGTCCCTTG AAGTGATTCC GATAAGGCGT
TTTGCTGTGA ATAGTCGCGT TGATGATGCT CCTTACGGTG GGGGACCTGG TATGGTGATG
CGTGCCGATG TACTGGGAGA GGCGTTTGAG TATGCGAACT CCACCTATCA AATAAAGAGA
CGTATATTTC TCAGTCCTAG GGGTACGAAA TTCGTACAGA ACTCTACCGC TAATTTAGTG
GAAGCTGATA ATGTCCTGTT AATTTGTGGG CGCTTCGAAG GAGTTGACCA AAGATTCTTG
AATTACTACA ATGTTGAAGA GCTCAGTGTC GGTGATTACG TACTTTCTGG TGGTGAGATT
GCTGCCATGG CGGTGATAGA CAGTTGTGTC AGGTGTATTC CCGGGGTTTT GGGCAATCTG
CAGAGTCTCG AGTGTGAGAG CTTTGTTGGT TCCTCGTTGG AGTACGACCA TTATACGCGG
CCGAACTCTT GGAAAGGATT GAGTGTCCCT GAGGTTCTTA TGAGTGGGAA CCACAGGAAG
ATAAGTGAGT GGAGGGTTAA CTCCGCTGCA ACCGCAACGG GTAGAAATAG GCCGGATTTG
GTTGAAGAAG AAAGTTAG
|
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| Protein sequence | MRFVVLTMFP EVFPGPLGVS VIGRGLANGY WSLEVIPIRR FAVNSRVDDA PYGGGPGMVM
RADVLGEAFE YANSTYQIKR RIFLSPRGTK FVQNSTANLV EADNVLLICG RFEGVDQRFL
NYYNVEELSV GDYVLSGGEI AAMAVIDSCV RCIPGVLGNL QSLECESFVG SSLEYDHYTR
PNSWKGLSVP EVLMSGNHRK ISEWRVNSAA TATGRNRPDL VEEES
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