Gene NSE_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0890 
Symbol 
ID3931407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp794298 
End bp795143 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content39% 
IMG OID637901045 
Producthypothetical protein 
Protein accessionYP_506756 
Protein GI88607963 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.679116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAGC TTGGGAAGTC TTCGAGTTCT CTTCTCTCTA TCCGCTCTTT TCAACGGCTT 
CGTATTTCTA CGTATGGGTG CATGAGGTCT TTTTTGTTTC GGTTTGTGTT ATCTCTTCCT
CTTTGCATTC ACTTTTCTTG TGGGTCTGTA GCTTTTGCGG TCCAACAAGT AGCTGAGCAG
AATGTGGATC TCAACTCTGT GGTAAAAGAG CTTGAAGCAA TAAGAGATGG CATATCAAAA
ATTGAAGTCC TTCTGGGAGA GTTGAAAAAG GGAGATACTG CATCTGAAGG AGTTCTGCTT
TATCCAACCA AAAAACCTCA AATCACACGG GAAAAGAGTC CTAAGAGGAA TGACCCTGAA
TTGAGCAACT TACACAACGT AGACAAAACA GCCCCATCCA ATATCAACAA GATAGAAAAA
ATAGGTTCGC CAGATGTTTC GGAGAGAAAT CATTACAAGA ACATCCTTTT ATTGATAGAG
CAATCACAAA GTGAAGAAGC TGAAAAAAGC TTAAACCAGT TTGTTGGACG ATTTCCTGAA
AGCAGTTTTT TAGACGATGT ATATTATTTC CTCGGAAACC TCCATTTGAA CAAGAAGCGA
TACAAAGCTG CGTTAGTTAG CTTTATAAAA AGTTATCAAG CAGACAAGAT GGGAATTCGG
GCACCTCTAG CACTAGTGAA ATCAATTAGT ATATTAAGAT CAACAGGAGA CTATAATCAC
GCATGCTCAA TTTTGCAGAA GGCTCTTAAA GAATTCTCAT CTAACTCTAC TGTCAAAACA
CAGCTCAAGA AGGAGAAAGA AATTCTCTCG CCACACTGTG AAAATATAAT GCAAGAATTC
GAGTGA
 
Protein sequence
MVKLGKSSSS LLSIRSFQRL RISTYGCMRS FLFRFVLSLP LCIHFSCGSV AFAVQQVAEQ 
NVDLNSVVKE LEAIRDGISK IEVLLGELKK GDTASEGVLL YPTKKPQITR EKSPKRNDPE
LSNLHNVDKT APSNINKIEK IGSPDVSERN HYKNILLLIE QSQSEEAEKS LNQFVGRFPE
SSFLDDVYYF LGNLHLNKKR YKAALVSFIK SYQADKMGIR APLALVKSIS ILRSTGDYNH
ACSILQKALK EFSSNSTVKT QLKKEKEILS PHCENIMQEF E